Bacillus glycinifermentans: BGLY_3199
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Entry
BGLY_3199 CDS
T04537
Symbol
yrrC
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bgy
Bacillus glycinifermentans
Pathway
bgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BGLY_3199 (yrrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bgy03400
]
BGLY_3199 (yrrC)
Enzymes [BR:
bgy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BGLY_3199 (yrrC)
DNA repair and recombination proteins [BR:
bgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BGLY_3199 (yrrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
HHH_5
AAA_22
AAA_12
AAA_16
UvrD-helicase
UvrD_C
T2SSE
nSTAND3
DUF4926
AAA
AAA_5
AAA_28
NPHP3_N
Rad17
NTPase_1
TsaE
AAA_17
AAA_18
AAA_29
Motif
Other DBs
NCBI-ProteinID:
SCA87022
LinkDB
All DBs
Position
1:complement(3099087..3101483)
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AA seq
798 aa
AA seq
DB search
MKHQNPDQMRMDEASFLKGTVTTVIYHNETNLYTVLKVKVQETSESFDEKTVSVTGYFPA
IFEDETYTFYGKTASHPKFGLQFQTDHFKKEVPTTKEGVIQYLSSDLFEGIGKKTAEEIV
NKLGEGAINKILGDASVLYDVPKLSKKKADKLAAALQQHQGLEQIMISLSEFGFGPQLSM
KIYQAYESETLDKIRENPYQLVKDVEGIGFVKADELGGRMGISGRHPERVKAAILFTIEA
ACLQEGHTYIETKQLIIETQKLLNQSPGEEKVTEMDVADSIISLGEQKELFIEDDRCYYP
SLYYAEQSFAKRVLTIAEQTEYDDQFPESEFLLALGELEERMQVQYAPSQKEAIQKALMS
PMLLLTGGPGTGKTTVIRGIVELYSELHGLSLNPADYKKDEAFPFVLAAPTGRAAKRMSE
STGLPAVTIHRLLGWNGSEGFTHDEDNPIEGRLVIIDETSMLDIWLANQLFKAIPNRIQV
IMVGDEDQLPSVGPGQVLRDLLASNVIPSVRLTDIYRQAEGSSIVELAHDMKKGRLPQNL
TAPTKDRSFIRCRQQQMKEVVEKVVQNALQKGYSARDIQVLAPMYRGPAGINELNVLLQN
ILNPPKQKGRELKYGDVVYRTGDKVLQLVNQPEHNVFNGDMGEIVSIFYAKENTEKEDMA
VVSFDGNEITFTKKDFNQFTHAYCCSIHKSQGSEFPIVILPVVKSYYRMLRRNLLYTAIT
RSKKFLILCGEEEALEWGIKNKDSSERQTSLKRRLQQAAHEEDEELAALQKELPFSIYDA
NIGMEGITPFDFMEKEAE
NT seq
2397 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaccaaaatccggaccaaatgcgaatggatgaggcgtcctttctgaagggaacg
gtaacaactgtcatctatcacaacgaaacaaatctctataccgtgctgaaagtaaaagtc
caggaaacatctgaatcgtttgatgagaaaaccgtttccgtcacaggttattttccggcg
atctttgaagatgaaacgtatacgttttacggaaaaaccgcctcccatccgaagttcggc
ctccaatttcagacggatcattttaaaaaagaagtccccacgacaaaagagggcgtcatt
caatatttgtcgagcgacttgtttgaaggcatcggcaaaaaaacggcagaagaaatcgtc
aataagctcggggaaggcgcgatcaacaaaattctgggcgacgcttcagtgctttacgac
gtcccgaagctgtcaaagaaaaaagcggataagcttgccgccgcgcttcagcagcaccag
gggctcgagcagatcatgatttcgttaagcgagttcggttttggaccccagctttcgatg
aaaatttatcaggcatatgaatcggaaacgcttgataaaatccgcgaaaatccgtaccag
ctcgtgaaggacgtcgaagggatcggctttgtgaaagcggatgaactgggcggccgaatg
gggatttcgggcaggcatccagaacgggtcaaagcggcgattttatttacgatcgaagcg
gcatgcctgcaggaagggcatacttacatcgagacaaaacagctcatcatcgagacgcaa
aagctgctgaaccagtcgccaggcgaagaaaaggtgaccgaaatggatgtggcggattcg
atcatttcgctcggcgaacaaaaggaattgttcatagaagatgacaggtgctactatcct
tcgctttactatgctgaacaaagctttgccaaaagggtgctgacgatcgcggaacaaacc
gaatatgacgatcagttccccgaatcggaatttttgcttgctttaggggagcttgaggaa
cggatgcaggttcagtacgcgccaagccaaaaagaagcgattcaaaaagcgctgatgtct
ccgatgctccttttaaccggaggaccggggactgggaaaacgacggtcatcaggggaatt
gtcgaattgtacagcgagcttcacggtttgagcttgaatccggctgattataaaaaagac
gaggcgtttccgtttgtcctggctgcgccgacaggcagagcggccaaacggatgagcgag
tcgacggggcttccggccgtgacgattcacaggctcctcggctggaacggttctgaaggg
tttacacatgacgaggacaacccgatcgaaggccggctggtaattatcgacgagacgagc
atgctcgatatatggcttgccaatcaattgttcaaagcgatacccaaccggatacaggtc
atcatggtcggagacgaagatcagcttccgtccgtcggaccgggacaggtgctcagggat
cttttagcctcgaacgtcattccttccgtcagattaaccgatatctaccggcaggctgaa
ggttcatcaatcgtggaacttgcgcatgatatgaaaaagggccggctgccgcaaaatttg
acagcgccgacaaaggaccggtcatttatcaggtgccgtcagcagcaaatgaaagaggtc
gtggaaaaagtcgtccaaaacgcattgcaaaaagggtattccgcacgggacatccaagtg
ctcgctccgatgtacagaggaccggcgggaatcaatgaattaaacgtgcttttgcaaaac
atcctcaatccgccgaagcaaaaaggcagggaattgaagtacggggatgtcgtctacagg
acgggagataaagttcttcagctcgtcaaccagccggagcacaatgtgtttaacggagat
atgggagaaatcgtctccatcttttatgcgaaggaaaatacggaaaaagaagacatggcc
gtcgtctctttcgacggcaacgagatcacattcaccaaaaaggattttaatcagtttacg
catgcttactgctgttcgattcataaatcgcagggcagcgaatttccgatcgtcatcctt
cccgtcgtcaaaagctattaccggatgctgagaagaaatctgctttatacggcaattaca
agaagcaaaaaatttctcattttgtgcggcgaagaggaagcgctcgaatggggcatcaaa
aacaaagattcctctgaaaggcagacttcgctcaagagaaggcttcagcaggcagcgcat
gaagaagacgaagagctcgccgcgctccaaaaggagctgccgtttagcatatatgacgcc
aatatcggcatggagggcattacaccgtttgactttatggaaaaagaggcggaataa
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