Bradyrhizobium guangzhouense: XH91_06100
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Entry
XH91_06100 CDS
T06161
Name
(GenBank) RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bgz
Bradyrhizobium guangzhouense
Pathway
bgz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XH91_06100
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgz03019
]
XH91_06100
Enzymes [BR:
bgz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
XH91_06100
Messenger RNA biogenesis [BR:
bgz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
XH91_06100
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
SUa-2TM
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
QAU44963
UniProt:
A0AAE6C6U0
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Position
complement(1249308..1250885)
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AA seq
525 aa
AA seq
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MRRALAFDMKRAPLLTSFQDFGLAEPIARALAEENYVTPTPIQAQTIPTALTGRDVVGIA
QTGTGKTASFALPILHRLLENRIRPQPKTCRVLVLSPTRELSGQILDSFNAYGRHIRLSS
TLAIGGVPMGRQVRALMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGF
INDIRKIVAKLPIKRQTLFFSATMPKDIAELADSMLRDPARVAVTPVSSTAERINQRIVQ
VDFSAKPTFLTKLLKDEPINRALVFTRTKHGADKVVKTLERAGIPASAIHGNKSQNHRER
TLAQFRSGEIRTLVATDIAARGIDVDGITHVINYDLPNVPETYVHRIGRTARAGADGTAI
SLVAGGEELSYLRDIERLIKVALPREDLRTDAGRRDAGAPPPQQQRQGRPGGRPGQRPQG
ARHGDGRRGDDRHADGRHHSSGKPSDGRPGEGRHGEARHADGRPGNGAKGSRRRRSGGKM
HSSPNERPEQRSAHSAGAPDGIQGVAFLRRESRPNGHPNRKPHSH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtcgggcgctcgcttttgacatgaaaagagcccctcttttgacttcctttcaggac
ttcggcctcgccgaacccatcgcacgtgcgctcgctgaagagaactacgtcacacccacc
cccatccaggcccagacgattcccacggcgctgaccggacgcgacgtcgtcggcatcgcc
cagaccggcaccggaaagactgcctccttcgcgctgccgatcctgcaccggctgctcgag
aaccggatcaggccgcagcccaagacctgccgcgtactggtgctgtcgcccacccgcgag
ctgtccgggcagatcctcgacagcttcaatgcctatggccgccacatccgcctgtcctcg
acgctcgccatcggcggcgtgccgatgggacgacaggtccgtgctctgatgcagggcgtc
gaggtgctggtcgccacccccggccgcctgctcgacctcgtgcagagcaacgggctgaag
cttggcagcgtcgagttcctcgtgctcgacgaagccgaccgcatgctcgacatgggcttc
atcaacgacatccgcaaaatcgtcgccaaactcccgatcaagcggcagacgctgttcttc
tcggccaccatgccgaaggacatcgccgagctcgccgattccatgctgcgtgatccggca
cgcgtcgcggtgaccccggtctcctcgaccgccgagcgcatcaaccagcgcatcgttcag
gtcgatttctcggccaagcccaccttcctgaccaagctgctgaaggacgagccgatcaac
cgtgcgctggtctttacccgcaccaagcacggtgccgacaaggtggtaaagacgctcgag
cgggccggtatccccgccagcgccatccacggcaacaagtcgcagaaccaccgcgagcgc
acgctcgcacagttccgctccggcgaaatccgtaccctggtcgccaccgacatcgccgcc
cgtggcatcgacgtcgacggcatcacccacgtcatcaactacgacctgcccaacgtgccg
gaaacttatgtgcaccggatcggccgcaccgcgcgcgccggcgccgacggcaccgcgatc
tcgctggtcgcaggcggcgaggaactcagctatctccgcgacatcgaacggctgatcaag
gtggcgctgccgcgcgaggacctccgcaccgacgccggccgccgcgacgcaggcgctcct
ccgccgcagcaacaacggcagggccggccgggcggccgaccgggccagcgtccgcaaggc
gctcggcatggcgacggacggcgtggtgacgacagacatgccgacggacgccaccacagc
tccggaaagccgagcgacgggcggcccggcgagggccgtcatggcgaggcgcggcatgcg
gacggaaggcctggaaacggcgcgaaggggtctcgccgccgccgctccggtggtaagatg
cattcttcgccaaacgaacgcccggaacagcgttccgcgcatagcgcgggagcgcccgat
gggatacaaggcgtggcctttttgcgccgtgagagtcggccgaacggccacccgaaccgc
aagccccattcgcactag
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