Bradyrhizobium guangzhouense: XH91_13655
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Entry
XH91_13655 CDS
T06161
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bgz
Bradyrhizobium guangzhouense
Pathway
bgz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XH91_13655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgz03019
]
XH91_13655
03009 Ribosome biogenesis [BR:
bgz03009
]
XH91_13655
Enzymes [BR:
bgz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
XH91_13655
Messenger RNA biogenesis [BR:
bgz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
XH91_13655
Ribosome biogenesis [BR:
bgz03009
]
Prokaryotic type
rRNA helicases
XH91_13655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QAU46304
UniProt:
A0AAE5X0J3
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All DBs
Position
2836604..2838640
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AA seq
678 aa
AA seq
DB search
MSFPALTPPLARALAERNYDSPTPVQLAVLGEEAVDRDLLVSAQTGSGKTVAYGLAMARD
LLGDTERFARAAAPLALIVAPTRELALQVQRELTWLYEHAGARVVSCVGGMDPRREQREL
TAGAHIVVGTPGRLCDHLRRNRLDTSELKVVVLDEADEMLNLGFREDMEFILETTPETRR
TLLFSATFPRGIVALAKQYQQDAFRIEVAGDEGGHADIEYRAIRVAPGDVEHAAVNILRF
YEAPSALVFCNTRDAVRHLQAALLERGFSVVALSGELTQNERTMALQSLRDGRARICVAT
DVAARGIDLPSLDLVIHADLPNDPEVMQHRSGRTGRAGRKGVSVLLVPPMRRRRAEVLLN
LSGIEANWGTAPQADEIRKLDHERMKDVLFTEDTSADDLELAKALLAERSAEDIAAALAR
LYRARLPSPEDIIDPGERSSRPRDDRHRDDRAPRGDDRSERPRAKSGKGSSKHVMAEPTV
WFRAAIGRRKNAEARWLLPMICRRGGIDKRDIGAIKISDTTTEFEISTRVAESFAAKVKR
PDKEDSIRIELLTGEPQAQAPAEKRIRAPQRDDGDDSHVVRRSDDPWNENAPKRHDRPRG
KPDAKHPGKPHAKSDFKPHDKPYAKPHAKSHDGDKFAKPAFGKKNKKFGNKSGDAKHAPS
VTEWPGASGKKNKKKRRG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctttccggccctgaccccgccgctcgcccgtgccctggctgagcgcaattacgat
tctccgacaccggttcagctcgccgtgctcggcgaggaggctgtcgatcgcgacctcctg
gtgtcggctcagaccggctcgggcaagaccgttgcgtacgggctggccatggccagggac
cttctgggtgataccgagcggttcgcgcgtgccgcagcacctctggcgctgatcgtcgcg
ccgacccgcgagctcgccttgcaggtccagcgcgagctcacctggctgtatgagcacgcc
ggggcgcgcgtcgtctcctgcgtcggtggcatggacccgcgccgcgagcagcgcgagctc
accgcgggggcccatatcgtcgtcggcacgcccggccgcctgtgcgatcatctcaggcgc
aatcgcctcgacacctcggaactgaaggtcgtcgtgctcgacgaggccgacgagatgctc
aatctcggctttcgcgaggacatggaattcatcctcgagactacgccggagacgcgccgc
accctgctgttctcggcgacctttccgcgcggcatcgtggcactggcaaaacagtaccag
caggatgcgtttcgcatcgaggtggcaggcgacgagggcggtcacgccgacatcgagtat
cgcgccatccgggttgctcccggcgatgtcgagcatgcggccgtcaatatcctgagattc
tacgaggcgccgagcgcgctggtgttctgcaacacgcgcgacgccgtccggcatttgcag
gcggcgctgctggagcgcggcttctccgtggtcgctctgtcaggcgagttgacgcagaac
gagcgcacgatggctcttcagtcgctccgggacgggcgcgcccgcatttgcgtggcgacc
gacgtcgctgctcgcggcattgatctgccgagcctcgatctcgtcattcacgccgatctg
ccgaacgatcctgaagtgatgcagcatcgctcgggccgcaccggccgcgccggccgcaag
ggcgtcagcgtcctgctggtgccgccgatgcgacggcggcgtgccgaggtattgttgaat
ttgtccggcatcgaggcgaactggggcacagcgccgcaggcggatgagattcgcaagctc
gatcacgaacgcatgaaggacgtgttgttcaccgaggacacgtccgcggacgatctcgag
ctcgcgaaggccttgctggccgagcggtcggcggaggacatcgcggcggcactggcccgg
ctctatcgcgcgcggctgccgtcgcctgaagacatcatcgatcccggtgagcgaagcagc
cggccgcgcgacgatcgtcatcgcgatgatcgggcgccgcgtggtgacgatcgttccgag
cggcctcgtgccaaatcggggaaggggtcatcgaagcacgtgatggcggagccgacggtc
tggttccgggccgccatcggacgccgcaagaatgccgaagcgcgctggctgctgccgatg
atctgccgccgcggcggcatcgacaagcgcgacatcggcgcgatcaagatcagcgacacc
accaccgagttcgagatctccacacgcgtcgcggaatcctttgccgccaaggtcaagcgt
ccggacaaggaagacagcatccgcatcgagctgttgacgggtgagccgcaagcgcaggcg
ccggcggagaagcgcatccgcgccccccagcgcgacgacggcgacgacagtcatgtcgtc
cgccgcagcgacgatccctggaacgagaacgcgccgaagcggcacgaccggccgcggggc
aagcctgacgcgaagcacccgggcaagccgcacgccaagagcgacttcaagcctcatgac
aagccttacgccaagcctcatgccaagtctcacgacggcgacaaattcgccaagccggcc
tttgggaagaagaacaagaaattcggaaacaaatccggtgacgccaaacatgcgccatcg
gtcaccgaatggccgggcgcgtcgggcaagaagaacaagaagaagcgccgcggctga
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