Bradyrhizobium guangzhouense: XH91_14495
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Entry
XH91_14495 CDS
T06161
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bgz
Bradyrhizobium guangzhouense
Pathway
bgz03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bgz00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
XH91_14495 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bgz03021
]
XH91_14495 (rpoC)
03400 DNA repair and recombination proteins [BR:
bgz03400
]
XH91_14495 (rpoC)
Enzymes [BR:
bgz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
XH91_14495 (rpoC)
Transcription machinery [BR:
bgz03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
XH91_14495 (rpoC)
DNA repair and recombination proteins [BR:
bgz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
XH91_14495 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
ApbA_C
DUF2130
Motif
Other DBs
NCBI-ProteinID:
QAU46452
UniProt:
A0AAE6C8E6
LinkDB
All DBs
Position
3007782..3011978
Genome browser
AA seq
1398 aa
AA seq
DB search
MNQEIMNLFNPTTPAQVFDQIRISIASPEKILSWSYGEIKKPETINYRTFKPERDGLFCA
RIFGPIKDYECLCGKYKRMKYKGIICEKCSVEVTLSRVRRERMGHIELAAPVAHIWFLKS
LPSRIGLLLDMTLKDLERILYFEYYVVLEPGLTALKDRQLLSEDEYLKAQDEYGQDSFTA
MIGAEAIRELLKGMDLEKLELSLRAEMQETDSDIKHKKLAKRLKIVEAFRHSGNKPEWMI
LTVVPVIPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLMELRAPDIIIRNEKRM
LQEAVDALFDNGRRGRVITGANKRPLKSLADMLKGKQGRFRQNLLGKRVDYSGRSVIVVG
PELRLHQCGLPKKMALELFKPFIYSRLDAKGLSTTVKQAKKLVEKERPEVWDILDEVIRE
HPVLLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCSAFNADFDGDQMAVHVPLSLEAQL
EARVLMMSTNNILHPANGQPIIVPSQDIVLGLYYVSIMREGLPGEGKLFGDMAELEHALH
AKVIHLHTKIKYRWEGMDETGKVSKRWIETTAGRVMLGNLLPKNPRISYEIINKLMTKRE
ISGVIDQVYRHCGQKETVIFCDRIMALGFYNAFKAGISFGKDDMVVPHSKWKIVDTTRTL
AKDFEQQYNDGLITHGEKYNKVVDAWSKATEEIAKAMMKEISSTKKTASGADADINSIYM
MAHSGARGSPAQMRQLAGMRGLMAKPSGEIIETPIISNFKEGLSVLEYFNSTHGARKGLA
DTALKTANSGYLTRRLVDVAQDCIITQSDCGTKLGIKMRAIVDAGTVVASLGSRILGRTA
CEDIRDNTGKVIIKRDTLMEESHLDAIQQGGVQEVKIRSALTCELVNGICGKCYGRDLAR
GTPVNHGEAVGVIAAQSIGEPGTQLTMRTFHIGGAAQLNEQSFVEANFDGKIVIRNKAIA
RNSEGHLVAMVRNMVVAIVDADGTERATHRVQYGARLHVDEGDMVKRGQRIVEWDPYTRP
LLTEVEGTIGFEDLVEGQSISETLDEATGIAKRVVIDWRSTRGGSDLRPAIVVKGKDGKV
LKLARGGDARYMLSVDGILSVDVGAKVNPGDILARVSTESAKTRDITGGLPRVAELFEAR
RPKDAAIIAEIAGTIRFGRDYKNKRRISIEPMDKTDEPREYLIPKGKHIHLQDGDVVEKG
DFIVEGNPAPHDILAVKGIEELAAYLVNEIQEVYRLQGVLINDKHIEVIVRQMLQKVEIT
DQGDTDMISGEQVDKIEFDALNEKAKEEGKKIATGTPVLLGITKASLQTRSFFSAASFQE
TTRVLTEAAVNGKVDPLEGLKENVIVGRLIPAGTGASMAKIREVAMKRDKLILDEREKQA
AVVSPAPEAELPALPPAE
NT seq
4197 nt
NT seq
+upstream
nt +downstream
nt
atgaaccaagaaattatgaatctctttaacccgacgacgccggctcaggtcttcgaccag
atccggatctcgatcgcgtccccggagaagattctgtcctggtcctacggcgagatcaag
aagccggagaccatcaactaccgtaccttcaagcccgagcgcgacggcctgttctgcgcc
cgcatcttcgggccgatcaaggactacgaatgcttgtgcggcaagtacaagcgcatgaag
tacaagggcatcatctgcgagaagtgctcggtcgaagtcacgctgtcgcgcgtccggcgc
gagcgcatgggccatatcgagctcgcggcgcccgtcgcccacatctggttcctgaagtcg
ctgccctcgcgcatcggccttctgctcgacatgacgctgaaggatctcgagcggatcctc
tacttcgaatattacgtcgtgctggagccgggcctcaccgcgctgaaggaccgccagctg
ctgtcggaagacgagtatctgaaggcgcaggacgagtacggccaggattccttcaccgcc
atgatcggcgccgaggcgatccgtgaactgctcaagggcatggacctcgagaagctcgag
ctcagcttgcgtgccgagatgcaggagaccgactccgacatcaagcacaagaagctcgcc
aagcgcctgaagatcgtcgaggccttccgccactccggcaacaagccggaatggatgatc
ctgactgtcgttcccgtgatcccgccggacctgcgtccgctggtgccgctggacggcggc
cgcttcgcgacctcggacctcaacgacctctatcgccgcgtcatcaaccgcaacaaccgc
ttgaagcggctcatggagctgcgcgcgcccgacatcatcatccgcaacgagaagcgcatg
cttcaggaagcggtcgatgcgctgttcgacaacggccgccgcggccgcgtcatcacgggt
gccaacaagcgcccgctgaagtcgctcgccgacatgctgaagggcaagcagggtcgcttc
cgtcagaacctgctcggcaagcgcgtcgactattcgggccgttcggtgatcgtggtcggt
cccgagctgcgcctgcatcagtgcggcctgccgaagaagatggcgctcgagctgttcaag
ccgttcatctattcgcggcttgacgccaagggcctgtccaccaccgtgaagcaggcgaag
aagctggtcgagaaggagcggcccgaggtctgggacatcctggatgaggtgatccgcgag
catccggtgctgctcaaccgcgcgccgacgctgcatcgtctgggcatccaggcgttcgag
ccggtgctgatcgaaggcaaggcgattcagcttcacccgctggtctgctcggcgttcaac
gccgacttcgacggcgaccagatggccgtgcacgttccgctgtcgctcgaagcgcagctg
gaagcgcgcgtcttgatgatgtcgaccaacaacatcctgcatcccgcgaacggccagccg
atcatcgtgccgtcgcaggacatcgtgctcggtctctactacgtctcgatcatgcgcgaa
ggtctgcccggcgagggcaagctgttcggcgacatggccgagctcgagcatgccttgcat
gcgaaggtcatccacctccacaccaagatcaagtatcggtgggaaggcatggacgagacc
ggcaaggtctccaagcgttggatcgaaaccaccgctggccgcgtcatgctcggcaatttg
ctgccgaagaacccgcgcatctcgtacgagatcatcaacaagctgatgaccaagcgcgag
atctcgggcgtcatcgaccaggtctaccgtcactgcggccagaaggagactgtgatcttc
tgcgaccgcatcatggcgctcggcttctacaatgcgttcaaggccggcatttcgttcggc
aaggacgacatggtcgtgccgcactccaagtggaagatcgtcgacaccacccgcacgctg
gcgaaggatttcgagcagcagtacaacgacggcctgatcacgcacggcgagaagtacaac
aaggtcgtcgacgcctggtcgaaggccacggaagaaatcgccaaggcgatgatgaaggag
atctcctccaccaagaagacggcgagtggagccgatgccgacatcaactcgatctacatg
atggctcactccggtgcccgtggttcgccggcgcagatgcgccagctcgccggcatgcgc
ggcctgatggccaagccgtcgggcgagatcatcgagacgccgatcatctcgaacttcaag
gagggcctctcggttctcgaatacttcaactcgacccacggtgcccgtaagggcctcgcg
gacaccgcgttgaagaccgcgaactccggctacctgacccgtcgtctggtcgacgtcgcg
caggactgcatcatcacgcagtccgattgcggtaccaagctcggcatcaagatgcgcgcc
atcgtcgatgccggcaccgtggtcgcttcgctcggttcgcgcatcctcggacgcacggcc
tgcgaagacatccgtgacaacaccggcaaggtgatcatcaagcgcgacacgctgatggaa
gagagccatctggacgccatccagcagggtggtgtgcaggaggtgaagatccgctcggcg
ctgacctgcgaactcgtcaacggcatctgcggcaagtgctacggccgcgacctcgcccga
ggcacgccggtcaaccacggtgaagccgtcggcgtcatcgcggcgcagtcgatcggtgag
ccgggcacccagctcaccatgcgcaccttccacatcggtggtgcggcgcagctcaacgag
cagtccttcgtcgaagccaatttcgacggcaagatcgtgatccggaacaaggccatcgcc
cgcaacagcgaaggtcacctggttgcgatggtgcgtaacatggtggtggcgatcgtcgat
gccgacggcaccgagcgtgcgacgcaccgtgtccagtacggcgcgcgcctgcacgtcgac
gagggcgatatggtcaagcgtggccagcgtatcgtcgagtgggatccctacacccgtccg
ctgctcaccgaagtggaaggcacgatcggcttcgaggatctggtcgaagggcagtcgatc
tcggaaacgctggacgaggccaccggtatcgccaagcgcgtggtcatcgactggcgctcg
actcgcggcggctcggacctgcgtccggccatcgtggtcaagggcaaggacggcaaggtg
ctcaagctcgcccgtggcggcgatgcccgctacatgctgtcggtcgacggcattctgtcg
gtcgacgtcggtgccaaggtcaacccgggcgacatcctcgcccgtgtctcgaccgaaagc
gccaagacgcgtgacatcaccggcggtctgccgcgggtggcggaactgttcgaggcacgg
cgtccgaaggatgcggcgatcatcgccgaaatcgcgggcaccatccggtttgggcgcgac
tacaagaacaagcgtcgcatctcgatcgagccgatggacaagaccgacgagccgcgcgag
tacctgatcccgaagggcaagcacatccaccttcaggacggcgacgtcgtcgaaaagggc
gacttcatcgtggaaggcaacccggcgccgcacgacatccttgcggtcaagggcatcgag
gagcttgcggcctatctggtcaacgagatccaggaggtctaccggctccagggcgtgctc
atcaacgacaagcacatcgaggtgattgtccgtcagatgctccagaaggtggagatcacc
gaccagggcgacaccgacatgatctcgggcgagcaggtcgacaagatcgagttcgacgcg
ctcaacgagaaggccaaggaagagggcaagaagatcgccacggggacgccggttctgctc
ggcatcaccaaggcgagcctgcagacccgctccttcttctcggcggcctcgttccaggag
accacccgcgtcctcacggaagcggcggtcaacggcaaggtcgatccgctcgaaggcctc
aaggagaacgtcatcgtcggccggctgatcccggcaggcaccggcgcctccatggccaag
atccgcgaagtcgccatgaagcgcgacaagctgattctcgacgagcgcgagaagcaggcg
gccgtggtgtcgcccgcgccggaagcggagcttcctgcgctgccgcctgcggaatga
DBGET
integrated database retrieval system
