Bradyrhizobium guangzhouense: XH91_16420
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Entry
XH91_16420 CDS
T06161
Name
(GenBank) MBL fold metallo-hydrolase
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
bgz
Bradyrhizobium guangzhouense
Pathway
bgz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bgz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
XH91_16420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bgz03019
]
XH91_16420
Messenger RNA biogenesis [BR:
bgz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
XH91_16420
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RMMBL
RNase_J_C
Lactamase_B
Lactamase_B_2
Motif
Other DBs
NCBI-ProteinID:
QAU46789
UniProt:
A0AAE5X138
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Position
3373193..3374863
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AA seq
556 aa
AA seq
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MAKPDELVFAPLGGVGEIGMNLSVYGLGNRHQRSWLAVDLGVSFGDEEHLPGIDLIMPDI
SFLEKERKNLMGLVLTHAHEDHFGAIIDLWPKLKCPIYATQFSAALFEAKCAAERNAPVI
PVTVVPSGGRIDVGPFNVEFIPVAHSIPEAHALAIHTEAGVVLHTGDWKIDPTPTLGRPT
DEKRLRELGEEGVLALIGDSTNAVRDGRSPSEAEVARTIIDLVKSAKGRVAVTTFASNVA
RIKAVADAAKAADREVVVVGRAMERVVQVARETGFLDGVQNFRSPEVYGHLPQDKVLALC
TGSQGEPRAALARIANDDHPEITLNRGDSVIFSSRTIPGNEKAVGSIINNLVLQGVEVLT
DRDHLVHVSGHPRRDELRDMISWVKPQLLIPVHGEALHLNEHAKLARAAGVPRVLVIRNG
DLVKLGPGDPGVVGEVPSGRLYKDGAILEDSKSRAVVERRRMAFSGCAFVAIAMTAQGEL
ADEPEVDLVGIPDKNRAGEPFDDIVFDAVMSTVEGLPKARRRDPDALAESVRRAVRAVIN
EHWGKKPPCLVHVLTV
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagcccgacgaactcgtgtttgcgccgctcggcggtgtcggcgagatcggcatg
aacctgtcggtctatggcctcggcaaccgccaccagcgttcctggttggcggtcgatctc
ggcgtctccttcggcgacgaggagcatctgcccggcatcgacctgatcatgcccgacatc
tccttcctggagaaggaacgcaagaacctgatgggcctggtgctgacccacgcccatgag
gaccatttcggcgccatcatcgacctctggccgaagctgaaatgtccgatctatgcgacg
cagttcagcgcggcgctgttcgaggccaaatgcgccgccgagcgcaatgcgcccgtcatc
ccggtcaccgtggttccgtctggcggccgtatcgatgtcggcccgttcaacgtcgagttc
atccccgttgcgcattcgattccggaagcgcatgcgctggcgatccacaccgaggccgga
gtggtgctgcacaccggcgactggaagatcgacccgaccccgacgctcggacgtccgacc
gacgagaagcggctgcgcgagctcggcgaggagggcgtgctcgccctgatcggggattcc
accaatgccgtgcgcgacggccgctcgccctcggaggccgaggtcgcccgcaccatcatc
gatctcgtgaaatcagccaagggccgcgtcgcggtcacgactttcgcctccaacgtcgcg
cgcatcaaggccgtggccgacgcggcaaaagccgccgaccgcgaggtcgtcgtggtcggc
cgcgccatggagcgcgtggtgcaggtcgcgcgcgagaccggctttctcgacggcgtgcag
aacttccgctcgcccgaggtctacggccacttgccgcaggacaaggtgctggcgctgtgc
accggcagccagggcgaaccccgtgcggcgctggcccgcatcgccaatgacgaccatcct
gaaatcacgctcaaccgcggcgacagcgtgatcttctcctcgcgcaccatccccggcaac
gagaaggcggtcggctcgatcatcaacaatctggtgctgcagggcgtcgaggtcctcacc
gatcgcgaccatctggtccacgtctccggccatccccgccgcgacgagctgcgcgacatg
atctcctgggtgaagccgcaactgctgatcccggtccatggcgaggccctgcatctgaac
gagcacgcaaaactcgcgcgcgccgccggcgtgccgcgcgtgctggtcattcgcaacggc
gacctcgtcaagctcggccccggcgatcccggcgtggtcggcgaggtgccgtcgggccgg
ctctacaaggacggcgccatcctggaggattccaagtcccgcgcggtggtcgagcgccgc
cgcatggcgttctccggctgtgccttcgtcgccatcgccatgaccgcgcagggcgagctt
gccgatgagcccgaggtcgatctggttggaatccccgacaagaaccgggccggagagccg
ttcgacgacatcgtcttcgatgccgtgatgtccacggtcgagggcctgccgaaggcgcgc
cggcgggatccggacgcgctggcggaatcggtgcgacgcgccgtccgggccgtcatcaat
gaacattggggcaaaaagcccccctgtctggtccacgtcctgacagtgtag
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