Halalkalibacterium halodurans: BH0162
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Entry
BH0162 CDS
T00039
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BH0162 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bha03021
]
BH0162 (rpoA)
03400 DNA repair and recombination proteins [BR:
bha03400
]
BH0162 (rpoA)
Enzymes [BR:
bha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BH0162 (rpoA)
Transcription machinery [BR:
bha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
BH0162 (rpoA)
DNA repair and recombination proteins [BR:
bha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
BH0162 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
DUF4249
HHH_5
Motif
Other DBs
NCBI-ProteinID:
BAB03881
UniProt:
O50634
LinkDB
All DBs
Position
182420..183364
Genome browser
AA seq
314 aa
AA seq
DB search
MIEIEKPVIETIEISEDAKYGKFVVEPLERGYGTTLGNSLRRILLSSLPGAAVTSVQIDG
VLHEFSTIEGVVEDVTTIVLNLKQLALKIYSDEDKTLEIDTQGEGVVTAGDLTHDSDVDV
LNPDLHIATLTTGAHLRMRITAKRGRGYVPAEGNKSDELAIGVIPIDSIYTPVSRVNYQV
ENTRVGQVTNYDKLTLDVWTDGSIRPEEAVSLGAKILTEHLNIFVGLTDQAQNAEIMVEK
EEDQKEKVLEMTIEELDLSVRSYNCLKRAGINTVQELTQKTEEDMMKVRNLGRKSLEEVQ
EKLGELGLGLRKEE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaatcgagaagccagtgattgaaacgattgaaattagcgaagatgctaagtac
ggaaaatttgtcgtagagccactagagcgtgggtatgggacaacactaggaaactcctta
cgtcgtatcctcctctcttcacttcctggagctgcggttacgtctgtacaaatcgatggc
gtcctgcacgagttctcaaccattgaaggagtcgtggaagacgtaacaaccatcgtctta
aacttaaagcaactcgcgttaaagatttactcagacgaagataaaacacttgaaatcgac
acacagggtgaaggtgtagtaacggctggtgacttaacccacgatagtgatgtagacgta
ttgaatccagatctacacattgccacgttaacaacaggtgctcatctacggatgcgtatt
acggcgaaacgggggcgcgggtatgttccagcagaagggaacaaatcggatgaactagca
attggtgtgattccaattgattcgatctacactcctgtctcgcgtgtaaactaccaagtg
gagaatacacgtgtcggccaagttacaaactatgataaactaacccttgatgtttggact
gacggaagcattcgcccggaagaagcagtttcacttggggccaaaattttaacggaacac
ctgaacatttttgtcgggttaaccgatcaagcgcaaaatgcggagattatggtcgaaaaa
gaagaagatcagaaagaaaaagttcttgagatgacaattgaagagcttgatctttccgtt
cgttcgtataactgtttaaagcgggctggtatcaatacggtacaagagctgacgcaaaaa
acagaagaagacatgatgaaagtgcgtaaccttggacgtaaatcattagaagaagttcaa
gagaaactgggtgagcttggactaggtcttcgtaaagaagaatag
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