Halalkalibacterium halodurans: BH0376
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Entry
BH0376 CDS
T00039
Name
(GenBank) DNA mismatch repair protein
KO
K07456
DNA mismatch repair protein MutS2
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BH0376
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bha03400
]
BH0376
DNA repair and recombination proteins [BR:
bha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
BH0376
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_22
Spectrin_SESTD1
Coatomer_E
Motif
Other DBs
NCBI-ProteinID:
BAB04095
UniProt:
Q9KFU5
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All DBs
Position
complement(404623..406338)
Genome browser
AA seq
571 aa
AA seq
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MNDTALQQLDYHHILETVASFAYTDRAKETIRMSKPTLNKKQIERMLHEVDEAGRILAIN
SSVPIHSLDDMTTYLEQAKKGLYLQPSQLQRVMSFLEHCRKLKRYMRDKVAVAPTVATYV
QSIEDMGDTEDEMARSLRHGQIDDHATPELANIRRHLRIKRAEVKEKAEAMCRSKKLASY
LQENIVVEKNGRFTIPIKKQYRSKVSGTVIDTSSSGATVFMEPKEVGALYEQLDDLLAAE
SYEVETILYTLTASVLAIEKELHLAMDIMHHYDVLFAKAKYGRSIDGVIPALNDDYTIHL
DDARHPLLGEQAVPLSLKLGIRERALIITGPNTGGKTVTLKTVGLLTLMAQTGLMIPAGP
KTSLHVFQKLFVDIGDGQSIEQNLSTFSSRLTNIIHILERADDQTLVLVDELGSGTDPNE
GMALAQVLLEQLFAKGATILATTHYRELKSLSKTHEGFLNGSMEFDVATLQPTYRLLLGE
TGNSQAFDIAFTLGLHPELIHRAQQLTGDQLGESRYTTTKDLDSTQRLRYERQLRTSNHI
RTKGKAKKAPIPQFNQGDNVTVSPHGAIGRL
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatacagctttacaacaacttgattatcatcacattttagaaaccgtagcatca
tttgcctatacagatcgggcaaaggaaacgatccgaatgagtaagcccacacttaataaa
aaacaaattgaacgcatgcttcacgaggtcgatgaagcaggacggattcttgccatcaac
tcaagtgtcccgattcattctctcgatgatatgaccacctatcttgagcaagcgaaaaag
ggattgtatttacagccgagtcagctccagcgcgtgatgtcgtttctcgagcattgccgc
aagctcaaaaggtatatgcgcgataaagtagcagtggctccaaccgtcgccacgtatgta
caatcaatcgaagatatgggcgatacagaagatgaaatggcgcgtagccttcgtcacggg
caaattgacgaccatgctacgccagagctggccaacatccgccgacatctcaggatcaag
cgagccgaagtaaaagaaaaagcggaagccatgtgccgttcgaagaagctcgcttcctat
ctccaagagaacatagtcgtcgagaaaaacggccggttcacgattccgatcaaaaagcag
tatcgctccaaagtttcaggcactgtaatcgatacatcgtcctcgggagcgaccgtattt
atggagccaaaagaagtgggagcactctatgaacaattggacgatttgctcgccgcagaa
agctatgaagtggaaacaattctctatacgttaacagcaagtgtgttggcgatcgagaaa
gaactgcacttggcgatggacattatgcaccactatgacgtcctatttgcaaaggcgaag
tacggtcgttcgattgatggcgtcatcccagcccttaacgatgactacacgatccatctc
gatgacgcacgccatcctctattaggggagcaagccgtgcctctttcgctaaagctaggc
attcgtgaacgggcgcttatcattacaggtccgaacacaggcggtaaaacagtgacgtta
aaaaccgtcgggctccttaccttaatggcacaaacaggcctgatgattccggctggaccg
aagacctcccttcacgtgtttcaaaagctattcgttgatatcggagatgggcaaagcatt
gaacaaaacttaagcacgttcagctcgaggttaacaaatattattcacatccttgagcga
gcggatgatcaaaccttggtgctcgtcgatgagctcggctcgggaaccgatccgaacgaa
ggaatggctcttgcccaagttcttttggagcagcttttcgcaaaaggagcgacgatttta
gctacgacccattaccgggagttaaagtccctatccaaaacacatgaaggctttttgaac
ggctcaatggagtttgatgtagcgacccttcagccaacctatcgcctattattaggggaa
acgggaaatagtcaagccttcgacattgcctttacactcggtctccatccagagctcatt
caccgagcccagcagcttacaggggatcagttaggagaatctcggtataccaccactaaa
gatctcgattcaacgcaaagacttcggtatgaaaggcagttgcgtacgtccaatcatata
cgaacaaaaggaaaggcaaaaaaagcaccgatcccccaattcaaccaaggggataacgtc
accgtctctccccatggtgccattggccgtctataa
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