Halalkalibacterium halodurans: BH0529
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Entry
BH0529 CDS
T00039
Symbol
sigB
Name
(GenBank) RNA polymerase general stress sigma factor(sigma B)
KO
K03090
RNA polymerase sigma-B factor
Organism
bha
Halalkalibacterium halodurans
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bha03021
]
BH0529 (sigB)
Transcription machinery [BR:
bha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BH0529 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
IF2_N
GerE
NirdL-like_HTH
DUF134
DUF1292
HTH_50
Motif
Other DBs
NCBI-ProteinID:
BAB04248
UniProt:
Q9KFF0
LinkDB
All DBs
Position
553422..554207
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AA seq
261 aa
AA seq
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MSMESLQHKRNNDEVYDWIESYQQGADEEIQTKLVKHYEPLVHSLARKFSRSRAHDDDLI
QVGMVGLLAAFERYDPKYGRSFESFAVPTIIGEIKRFIRDKTWSVHVPRRIKELGPKIKK
AADELASELQRSPRVEEIADFLGVSEEEVLETMEMGKSYQALSVDRSLEADPEGGEVTLL
DLVGQEDGGYEKADQQMLLEKAFQVLDEREKQILLCTYFEHLSQKETGHRLGISQMHVSR
LQRRALKKLRDSIRVELSECI
NT seq
786 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgatggaatctctgcaacacaaacggaacaacgatgaagtatacgattggattgaa
tcttatcagcaaggggctgacgaggagatccaaaccaagcttgtcaagcattatgagccg
cttgtccattcccttgcaagaaaattttcccgtagtcgtgcccatgacgatgatttgatt
caagtggggatggttgggttactcgcggcttttgaacgatatgatccaaagtacggacga
agttttgaatcctttgcagtcccgacgatcattggtgaaattaaacgattcattcgcgac
aaaacatggagcgtccatgttccgcgtcgcataaaagagctagggccaaaaatcaaaaaa
gcagcagatgagcttgcatcggaacttcaacgctctccaagagttgaagaaattgcagac
tttctaggcgtatctgaagaagaagtgcttgaaacaatggagatggggaaaagctatcaa
gccttatctgtagatcgttcccttgaagcggatccagagggcggtgaggtgaccctttta
gatttagtcggtcaagaagatgggggctatgaaaaagccgatcagcaaatgttgctggaa
aaagcgtttcaagtgttagatgagcgggagaagcaaattttgctttgtacgtactttgag
catttgagtcaaaaggagacaggacaccgtttggggatttcacaaatgcatgtttctcga
ttacagcgacgcgccttaaaaaaactacgcgactccattcgggttgaactgtcggagtgc
atataa
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