Halalkalibacterium halodurans: BH0648
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Entry
BH0648 CDS
T00039
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03420
Nucleotide excision repair
bha03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BH0648 (pcrA)
03430 Mismatch repair
BH0648 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bha03400
]
BH0648 (pcrA)
Enzymes [BR:
bha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BH0648 (pcrA)
DNA repair and recombination proteins [BR:
bha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BH0648 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
BH0648 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
ResIII
AAA_12
AAA_16
DNA_Packaging_2
Motif
Other DBs
NCBI-ProteinID:
BAB04367
UniProt:
Q9KF38
LinkDB
All DBs
Position
699605..701848
Genome browser
AA seq
747 aa
AA seq
DB search
MFGGVTNVQRKIIEKMLAGLNDRQREAVKHTEGPLLLMAGAGSGKTRVLTHRIAYLLREK
GVAPWNVLAITFTNKAAREMKDRVAQLVGPIADDIWISTFHSMCVRILRRDIDRIGYSRN
FTILDSTDQLSVIKQILKNNNIDSKKFEPRSILGTISGAKNELKTPEQFMGIAKGPYEET
AAEVYVEYQKQLKKNQALDFDDLIMKTTSLFKKVPEVLEYYQRKFQYILVDEYQDTNRAQ
YMLVKMLGDRHKNVCVVGDSDQSIYKWRGADIANILSFEEDYQDAEVILLEQNYRSTKTI
LEAANRVIENNVKRKPKNLWTENEQGAKIGFYKADTEQGEAQFVVEKIREAIQDGASYKD
IAILYRTNAQSRVMEEMLIKSNIDYNIVGGTKFYDRKEIKDVLAYLRLVANPDDDISLQR
IINVPKRGIGATTVDKIAAYAERQGISMFAALKEIEQIGVTSRAVSKLVEFTEQLGHWVQ
MQEYLSVTELVEELLERTGYRDMLQNEKTLEAQSRLENIDEFLSVTQEFEKSSDDKSLIA
FLTDLALISDIDKLDDEDDGAKPTDAVVLMTLHSAKGLEFPIVFLIGLEEGIFPHSRSLF
EDDEMEEERRLAYVGITRAEKQLYLTSAQLRTIYGRTNANPPSRFIDEIPEDCLEFLNEP
QEELPWMKTSRPVTKAKQPSRSVPQMTTTGGEQFAWTVGDKAEHKKWGIGTVVSMKGEGD
SLELDIAFPPPTGIKRLFAKFAPITKA
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
gtgtttggtggtgttacgaacgtgcaacggaaaatcatagaaaaaatgttggcaggattg
aatgacagacaacgagaagcggtgaagcacacagaagggcccctgctactaatggcagga
gccggaagtggaaagacaagagtactaacgcaccggattgcctatttattacgtgaaaaa
ggggttgccccgtggaacgtattagcgattacgtttacaaataaagcggctcgggagatg
aaagaccgggtcgctcagcttgttggaccgatcgcagatgatatttggatctccacgttc
cactctatgtgcgttcgcatcctacgccgcgacatcgatcggatcggctatagtcgtaac
tttacgattttagattccaccgatcaattgtcagtgatcaagcaaattttaaaaaacaac
aacatcgattcgaagaaatttgaaccgcgtagcattttaggtacgatcagcggcgctaaa
aatgaattgaagacacctgaacaatttatgggcattgcaaaaggaccttatgaggaaacg
gcagcagaagtatatgtcgagtaccaaaagcaactaaagaaaaaccaagcgctcgatttt
gacgacctcatcatgaagacaactagtctcttcaaaaaagttccagaggtacttgagtac
taccagcggaagtttcagtatattctagtggatgagtaccaagatacaaaccgagcccaa
tatatgctcgtgaagatgcttggggatcgccataaaaatgtgtgtgttgtcggggattcg
gatcagtcgatctataaatggcgcggggccgatatcgccaacattctttcatttgaagag
gattaccaagacgcagaggtcattttacttgaacaaaactaccgttccacgaagacaatc
ttagaagcagccaaccgcgtcatcgaaaacaatgtgaagcggaagccgaaaaacctctgg
acggaaaatgagcaaggggcgaagattggcttttataaagctgatacggagcaaggagaa
gcccagtttgtcgtagaaaaaattcgtgaagcgattcaggatggtgcctcttataaagac
attgccatcctttaccgaacaaatgctcagtcccgtgtcatggaggaaatgctcattaaa
tcgaacattgactacaatattgtcggcgggactaagttctacgatcgaaaagaaattaag
gatgtgctcgcgtatttacgtctcgtggctaaccctgatgacgacattagcttgcagcgc
atcatcaatgttccgaagcggggaatcggagcgacgaccgttgataaaattgctgcttat
gcggagcgacaagggatctcgatgtttgccgctctaaaggagattgagcaaatcggtgtc
acctcccgtgcggtaagcaaattagttgagtttactgagcagcttggtcattgggtgcaa
atgcaagaatatttgtcagtcactgaactagtggaggagctgcttgagcggacaggctat
cgcgacatgttgcaaaacgaaaaaacactcgaagcccaaagccgacttgagaacattgat
gaatttttgtccgtaacccaagagtttgaaaaatcgagtgacgataaatcgctcattgcc
tttttaaccgatttagcactcatttcggacatcgataagcttgatgatgaggacgatgga
gccaagccaaccgatgccgttgtgctcatgaccctccattcagccaaaggactcgaattt
ccgatcgtctttttaatcggactggaggaaggcatctttccacatagccgttctcttttt
gaagatgatgaaatggaggaggagcgtcgtttagcctatgttgggattactcgtgccgaa
aagcagctttatctaaccagtgcccagctgcgaacgatttacggacgaacaaatgccaac
ccgccgtcccgttttatcgacgaaattccagaagattgcctcgaatttttgaatgaaccg
caagaagaacttccgtggatgaagacatcacgaccggtgacaaaagcgaaacaaccatct
cgttctgtgccgcaaatgacaacgacgggaggcgaacaatttgcatggaccgttggggac
aaagcggagcataaaaagtggggaattggcacggtcgtaagcatgaagggggaaggcgac
tccctggagcttgacattgcattcccgccgccgaccggcatcaaacgactatttgcaaag
tttgcaccgattacgaaagcgtaa
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