Halalkalibacterium halodurans: BH1376
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Entry
BH1376 CDS
T00039
Symbol
sigA
Name
(GenBank) RNA polymerase major sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
bha
Halalkalibacterium halodurans
Pathway
bha02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BH1376 (sigA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bha03021
]
BH1376 (sigA)
Transcription machinery [BR:
bha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BH1376 (sigA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4
Sigma70_r1_1
Exonuc_VII_L
DUF5347
DUF2316
Motif
Other DBs
NCBI-ProteinID:
BAB05095
UniProt:
O66381
LinkDB
All DBs
Position
1461302..1462420
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AA seq
372 aa
AA seq
DB search
MAEKPLRPLAEGELSIDQVKEQLVELGKKRGVLTYAEITEKLAPYDQDSDQMDEFFEYLG
EQGVEILNDNEEVPSLQQVEKEEEEFDLNDLSVPPGVKINDPVRMYLKEIGRVPLLTAEE
EIELATRIEQGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAVEKFD
YNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGREPSP
EEVAEEMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDQDALAPSDAAAYELL
KEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALRKLRH
PSRSKRLKDFLE
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaaaccgttacgcccattggcagaaggtgaactttccatcgatcaagtaaag
gaacaattggtggagttagggaaaaagcgtggcgttctcacttatgctgagatcacggaa
aagctagctccatacgatcaagactcagaccaaatggacgagttttttgagtatctaggt
gaacagggggtcgagattttaaacgataatgaagaggttccaagcttgcaacaagtagag
aaggaagaagaggagtttgacttaaacgacttgagtgtacctccaggtgttaagattaac
gatcctgttcgcatgtatttgaaggaaattggtcgtgtcccgctattaacggccgaagaa
gaaattgaactagctacgcgaattgagcagggagatgaagaagcgaagcgtcgcttagct
gaagcgaacttacgtctcgttgttagtatcgccaaacgttacgtcggtcgtggcatgctg
tttcttgaccttattcaagaaggtaacatgggactaattaaagcggtagaaaaatttgat
tataacaagggctttaagttcagtacgtacgctacatggtggatcagacaagcaattaca
cgcgcaattgccgaccaagcacggacgatccgtatcccggtccatatggtggaaacgatc
aataagttaatacgtgttcagcgtcagcttctccaggatctaggtcgtgagccatcacct
gaggaagttgcggaagagatggatttaacacctgagaaagttcgagagattcttaaaatc
gctcaggagcctgtttcgctcgagactccgataggcgaagaggatgattctcacctagga
gattttattgaagatcaagatgcgttagctccttcagatgcggctgcttatgagttatta
aaagagcagctagaagatgttcttgacacgttgactgatcgtgaagaaaatgttctccgc
cttcgctttgggcttgatgatgggcgcacacgtacgttagaagaagtagggaaggtcttt
ggcgtcactcgagagcgcatccgccaaattgaggcgaaagcgttacgtaaacttagacac
ccaagccgtagtaaacggttgaaggacttcttagaataa
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