Halalkalibacterium halodurans: BH1607
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Entry
BH1607 CDS
T00039
Name
(GenBank) ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BH1607
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bha03019
]
BH1607
03400 DNA repair and recombination proteins [BR:
bha03400
]
BH1607
Enzymes [BR:
bha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BH1607
Messenger RNA biogenesis [BR:
bha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BH1607
DNA repair and recombination proteins [BR:
bha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BH1607
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
PTHB1_hp
Motif
Other DBs
NCBI-ProteinID:
BAB05326
UniProt:
Q9KCG4
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All DBs
Position
1683318..1684793
Genome browser
AA seq
491 aa
AA seq
DB search
MNLEQELHKWFGYHSFRSGQKEVIEALVEGNDVFAMLPTGTGKSICYQLPARITEGVTLV
ISPLLSLMEDQVQQLKSNGWKDVAALSSFLSKGAKERIIKQLHLYKLLFLSPEMVQHPVV
FKRLKQVKVSYFVVDEAHCISQWGHDFRPDFLRLSDVKHQLGNPPCLALTATATPAVQQD
ILTQLSIDEAVTIVHSVDRPNISISVEQTPTVKDKLEVIRGIIERHSGAGIIYFSSRLWS
EQIARELMLNVKKRVAFYHGGMSNEDRILIQQQFMAGELDLICSTSAFGMGINKQDIRFV
IHYHYPQQIASYVQEIGRAGRDGLASSAYVLFSEEDKGLARSLMTHDHPSKDEIIQMIQD
CQTTEVPSYGGDVATAHRFVRFLLERFKKRNRTVDDFVSIVESHFQQRERIKAKELYLVE
EWLQTKECRRERLLSFFSEQLTSRPVRCCDNCGLKDQPGEQASAIIAVDQTVPHWRERLA
LLCHQSKGGRG
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atgaatttggaacaagaattacataaatggtttggataccattcgttccgctcaggacaa
aaagaagtgatagaagcgctagtggaggggaacgatgtgtttgcgatgcttccgacaggt
actgggaagtccatttgttatcaattaccggcgcgaataacagaaggggtaacgctcgtc
atttcaccactgctttcactaatggaagatcaagtgcagcaactgaaatcgaacggctgg
aaagacgtggcggcgcttagtagctttctgtcaaaaggagctaaggagcgaattattaaa
cagcttcatctgtacaagctgttgtttctctctcctgaaatggtgcagcaccctgtcgtt
ttcaagcggttaaagcaagtgaaggtgtcgtattttgttgtggatgaagcccattgtatt
tcccaatggggacatgattttcgtccagacttccttcgcctctcagacgtgaaacaccag
cttgggaatccaccatgtttggcgttgacagcaacggctaccccagctgttcagcaagac
atcttaacccaattatcgattgatgaggcagttacgattgttcatagtgtggacaggcca
aacatatccatttcggtagagcaaacaccgaccgtaaaggataagcttgaagtaattcgg
gggattattgagcgacatagcggggcggggattatttatttttcaagccgtttatggagt
gagcaaatcgctagggagcttatgttgaatgtcaagaaacgagtggccttttatcatggg
gggatgagcaacgaggatcgaatcttgatccaacagcaatttatggcgggagagcttgat
ttgatttgcagtacgagtgcatttggaatgggcattaacaagcaagatattcgctttgtg
attcattaccattacccgcagcagatcgcctcatatgtccaggaaatcggtagagccggt
cgtgatggacttgcgagtagcgcctatgtgctgttttcggaggaggataagggattagct
cgttcgctcatgacacatgatcacccgtcaaaggatgaaatcattcaaatgattcaagat
tgtcaaacaactgaagtgccttcatatggcggggatgtagcgacggcacacagattcgtc
cgcttcttgcttgagaggtttaagaaaaggaaccggaccgttgatgatttcgtatccatt
gtggaatcccactttcaacagcgcgagcgaataaaggcaaaagaactatacttagtcgaa
gaatggttacagacaaaggaatgccgccgggaaaggcttctgtcatttttttcagaacaa
ctgacaagccggcctgtacggtgctgtgataattgtggtttaaaagaccagccaggtgag
caagcctctgccatcatagcagtggatcaaacagtgccgcattggcgcgagcgtctagcc
ttattgtgccatcaatcgaaaggagggcggggatga
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