Halalkalibacterium halodurans: BH1636
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Entry
BH1636 CDS
T00039
Symbol
ypfD
Name
(GenBank) 30S ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
BH1636 (ypfD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
bha03011
]
BH1636 (ypfD)
Ribosome [BR:
bha03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
BH1636 (ypfD)
Bacteria
BH1636 (ypfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
OB_RRP5_4th
S1_2
DUF2110
S1_RRP4
EXOSC1
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
BAB05355
UniProt:
Q9KCD6
LinkDB
All DBs
Position
1712758..1713909
Genome browser
AA seq
383 aa
AA seq
DB search
MVEEMNNEVTEMKSFSVGDVVSGKVTKVEDKQAFVDVGFKVDGIIPISELSSLHVEKVSD
VLSEGDELELKVLKVEDDELILSKRAVQAEKAWETLQAALDSGEVIEAEVADVVKGGLVV
DLGVRGFIPASLVERHYVEDFSDYKGRTLRLKVVELDKEANKLILSQRAVLDEEVEAKKK
EVLASLQPGDVVEGTVQRLTDFGAFVDVGGVDGLVHISQLAHHRVETPAEVVKEGDAVKV
KVLSVDPDSERVSLSIKETLPGPWEQVEGTIQPGDVIEGTVKRLVSFGAFVEVAPGVEGL
VHISQIANRHIGTPGEVLSEGERVQAKVLDVNISEKRISLSIRELLDDAGSNQSDREVYE
STNEESSGFSLGDMIGDELKKYK
NT seq
1152 nt
NT seq
+upstream
nt +downstream
nt
atggtcgaagaaatgaacaatgaagtcacagagatgaaatctttttctgttggagatgtt
gtcagcgggaaagtgacaaaagtcgaagataagcaagcgttcgtcgacgtaggctttaaa
gtggatggcatcattccaattagcgagctttccagcttgcatgtggagaaagtaagtgac
gttctgtctgaaggggacgagcttgagctaaaagtattaaaagtggaagatgatgagctc
attttgtctaagcgtgcagtccaagcagaaaaagcatgggaaacgcttcaagctgccctt
gattcaggagaagtaatcgaagctgaagtggcagatgtcgtcaaaggaggtctcgtcgta
gatttaggcgtccgtggcttcattccagcgtctctcgtcgaacgtcattatgtagaagat
ttctcagactataaaggacgcactcttcgccttaaagtggtggagcttgataaagaagcg
aataagcttattctatctcagcgtgccgttcttgatgaagaagttgaagcgaagaagaaa
gaagtgcttgcatccctacaaccaggtgatgttgttgaaggaacggttcagcggttaaca
gactttggagcctttgtggatgttggcggtgtagatggacttgttcatatctctcaactt
gcccaccatcgagtggaaacaccggcagaagttgtaaaagaaggagacgcagtaaaagta
aaggttttatctgtagatcctgatagcgagcgcgtatcgttatcgattaaagagacattg
ccaggtccttgggagcaagtggaaggaacgattcagccgggtgatgtcatcgaaggaaca
gttaaacgactcgtatcctttggagcctttgtagaagtagctcctggagttgagggactc
gttcatatttcgcaaattgccaatcgccacatcggaacacctggagaagtactatcagaa
ggcgaacgtgtacaagcgaaagttctagatgtgaacatctctgaaaaacggatttcgctc
agcattcgtgaacttttagacgatgctggaagcaatcaaagtgaccgtgaagtttatgaa
agcacgaatgaggaatcctcaggtttctcactcggtgatatgattggtgacgaactgaaa
aaatacaagtaa
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