Halalkalibacterium halodurans: BH2384
Help
Entry
BH2384 CDS
T00039
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BH2384
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bha03019
]
BH2384
03009 Ribosome biogenesis [BR:
bha03009
]
BH2384
Enzymes [BR:
bha01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BH2384
Messenger RNA biogenesis [BR:
bha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BH2384
Ribosome biogenesis [BR:
bha03009
]
Prokaryotic type
rRNA helicases
BH2384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Helicase_RecD
AAA_30
AAA_19
PG_binding_4
Motif
Other DBs
NCBI-ProteinID:
BAB06103
UniProt:
Q9KAA6
LinkDB
All DBs
Position
complement(2504383..2506002)
Genome browser
AA seq
539 aa
AA seq
DB search
MNEAMIKFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAF
GIPVVEKVSTGRHVQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQSIVHQIKAL
KQGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDDIESILRQVKNERQ
TLLFSATMPPAIKKLSRKYMNDPQTVSINRREVTAPSIDQFYYKVLERNKLDSLCRIIDS
EQIDLGILFCRTKKGVAELTEALQARGYIADGLHGDLTQSQRDAVMRKFRDSSIEFLIAT
DVAARGIDVGNVSHVINYDIPQDPESYVHRIGRTGRAGRKGLALTLVTPREMKHLRSIEQ
EIKMSIPSQEVPTIEDVVEKQKESWKKQIAHRIEKGSNQKHLFEQMTEELMAEYDSKEVI
SALLQLNYAMDTAPEDAGYSFGETGGAKGMVRFFINVGRNVNMSPKILVEEIAELVGIPG
KAIGRIDIFEKFTFVEVPEEVAPFVYEALRYSRINGARVNLEPAKPRPKRESQRRTFQK
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagcaatgataaagtttaatgagttacaaattggagaagaaattaaaaaggcg
attattgagatgggatttgaagagccatctcctatccaagcaaaggcgattcctgcaatc
cttgcaggtggtgatgtcattggccaagcccaaacaggaacaggaaaaacagctgcattt
ggcataccagtagtggaaaaagtgtcgacgggccgccatgtacaggctcttatcttaaca
cctacacgagagctagcaatccaagtgtcaggagaaattcaaaagctttccaagcacaaa
aaaattcgtacccttccgatttatgggggacaatcgattgttcatcaaatcaaagcttta
aaacaaggagttcaagtcgtcattgggacaccgggtcgtattatcgatcatctgcgtcgg
aaaacgttaattttagaccacgttaatacagtgattttagacgaagctgatgaaatgctt
gatatgggctttatcgatgatatcgagtccattctgcgccaggtgaaaaatgagcgccaa
accttgcttttctctgcgacgatgccgccagcgattaaaaagctatctcgcaaatatatg
aacgatccacaaaccgtatccatcaatcgacgagaagtgacagcaccttctatcgatcaa
ttttattataaagtgttagagcggaataaattagattctctttgccggattattgacagc
gagcagattgatcttggaattttgttttgccggacgaaaaaaggtgtggcagagctaacg
gaagcattgcaagctcgcggttacattgccgatggattacacggtgatttaacacaatct
cagcgtgatgcagttatgcggaaattccgtgactcatcgattgaattcttgattgccacc
gatgtggcggcgagagggattgacgtggggaacgtctctcacgtgatcaattatgatatt
ccccaagatccagaaagctatgttcaccggatcggtcgtacaggccgtgcaggacgtaaa
gggcttgcacttacgcttgtcacgccaagggaaatgaaacatctccgttcgatcgaacaa
gaaattaaaatgtcaatcccgtctcaagaagtgccgacgattgaagatgtggtggaaaaa
caaaaagaatcatggaagaagcaaatcgcccatcgaattgagaaaggctctaaccaaaag
cacctcttcgagcaaatgactgaagagttgatggcagagtacgattcaaaagaggtgatc
tctgctctccttcaattaaactacgcgatggacacagctcctgaggatgcgggatatagc
tttggggaaaccggtggtgccaaaggcatggtccgtttctttatcaatgttggtagaaat
gtgaatatgagtccaaagattcttgtcgaggagattgcagagcttgttggcattcctggt
aaggcgatcggccgaatcgacatctttgaaaaattcacgtttgttgaagtgcctgaagaa
gtggctccgtttgtttatgaagcgcttcgttactcaaggatcaacggtgctcgtgtgaac
cttgagccagcaaaacctcgtccaaagcgggaatcacagcgaagaacatttcaaaaatag
DBGET
integrated database retrieval system
