Halalkalibacterium halodurans: BH2431
Help
Entry
BH2431 CDS
T00039
Symbol
sigD
Name
(GenBank) RNA polymerase sigma-D factor
KO
K02405
RNA polymerase sigma factor FliA
Organism
bha
Halalkalibacterium halodurans
Pathway
bha02020
Two-component system
bha02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BH2431 (sigD)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BH2431 (sigD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bha03021
]
BH2431 (sigD)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
bha02035
]
BH2431 (sigD)
Transcription machinery [BR:
bha03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BH2431 (sigD)
Bacterial motility proteins [BR:
bha02035
]
Flagellar system
Flagellar assembly proteins
Stator
BH2431 (sigD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r3
Sigma70_r4_2
DUF1492
HTH_10
HTH_AsnC-type
HTH_Tnp_ISL3
UPF0122
Motif
Other DBs
NCBI-ProteinID:
BAB06150
UniProt:
Q9KA59
LinkDB
All DBs
Position
complement(2554839..2555609)
Genome browser
AA seq
256 aa
AA seq
DB search
MSSVSTMADDKIWTEWLTERSQEACDALIRQYLPLVHYHVQRISVGLPRSVSKDDLISHG
MLGLLDALEKFNPDRDLKFDTYASFRVRGAILDGLRKEDWLPRSMREKIKKIEAATEKLE
QKLGRNVSVEEVAKEVGISENEVSQTMTESLVANLLSMDEKTNDSDREETYTATIIDKQS
LSPEEKLLEEAQKEELSQLIANILNEKEQLVIGLFYFEELTLTEIGQILKLSTSRISQIH
SKALFRLQQALKKRNA
NT seq
771 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagtgtttctacgatggcggatgataaaatttggacagagtggttgactgagcgt
agtcaggaggcgtgtgatgcgttaattcgccaataccttcctcttgtccactatcacgta
cagcgaatttcagttggcttgccgcggagtgtgagcaaggatgatctaatcagtcatggg
atgctcggtttattagatgcactagaaaaatttaacccagaccgtgacttgaagtttgat
acgtacgcttcgtttcgcgtaaggggggcgatcttggacggattaaggaaagaggattgg
ctaccgagatcgatgcgtgaaaaaattaaaaagattgaagcggcgactgaaaagctagag
caaaagctaggacgaaacgtatcggtagaagaagtggcgaaagaagtcggtataagtgag
aatgaggtttcacaaacaatgacggaatcgctcgtcgcaaacctgctatccatggatgaa
aagacaaacgatagtgatcgggaagaaacgtataccgctacgattatcgataaacaatcc
ttaagtcctgaagaaaaattactagaagaggcgcagaaagaggaactttcacaattgatc
gcgaatatattaaatgaaaaagagcaattagtcatcggtcttttttactttgaagaattg
acattaacagaaataggacaaattctaaagttatcgacatcacgaatctcacaaattcat
tcgaaggcgttgttccggctgcaacaggcattgaaaaaaagaaatgcataa
DBGET
integrated database retrieval system
