Halalkalibacterium halodurans: BH3152
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Entry
BH3152 CDS
T00039
Symbol
mutM
Name
(GenBank) formamidopyrimidine-DNA glycosidase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BH3152 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bha03400
]
BH3152 (mutM)
Enzymes [BR:
bha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
BH3152 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BH3152 (mutM)
DNA repair and recombination proteins [BR:
bha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BH3152 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
eIF-5_eIF-2B
Auto_anti-p27
Motif
Other DBs
NCBI-ProteinID:
BAB06871
UniProt:
Q9K855
LinkDB
All DBs
Position
complement(3266361..3267185)
Genome browser
AA seq
274 aa
AA seq
DB search
MPELPEVETVRRTLAELVIGKTIEQVDVGWAKMIKRPDDVDQFKWLLKGQTIRSMGRRGK
FLLFHLDDYTLVSHLRMEGRYGLYQQNESVAKHTHVRFVFGDGTELRYQDVRKFGTMHLF
QSGREQMEPPLAKLGVEPFSDQFSAKLLTERLSKTSRKIKSALLDQGIIVGLGNIYVDEA
LFRARIHPERLAKDVTVAEVKILHQAILNTLTEAVNLGGSSIKSYVNGQGEMGMFQQRLD
VYGRKGETCRQCGTPITKTVVGGRGTHFCSVCQK
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattaccagaggtggaaacggtgcggcgaaccctcgccgagttagtaattggg
aaaacaattgaacaagtcgatgtcgggtgggcgaaaatgatcaaaagacctgacgatgtg
gatcaatttaagtggctgctcaaagggcaaacgatccgttccatggggagacgaggaaag
tttcttctgtttcacttagatgactataccctagtgagccatttgcgaatggaagggcgc
tacgggttgtatcaacaaaatgaaagtgtagccaagcatacccacgttcgattcgtcttt
ggagatggcaccgagcttcgctaccaagatgtccgtaaatttggaacgatgcacctcttt
cagagcggaagggaacaaatggagccgcctttggccaaactaggagtggagccgttctct
gatcagttttccgccaagcttctaaccgagcgcttatctaaaacgtcccgcaaaatcaaa
tcggctttgctcgatcaaggaattattgttggactgggaaacatctatgtggatgaggcg
ctatttcgggcgcgaattcacccagaacgattagcgaaagatgtaaccgttgctgaggtg
aagattctccaccaagcgattttaaatacattgacggaagcggtgaaccttggtggtagt
tcgatcaaatcgtatgtcaacggacaaggggaaatgggcatgtttcagcagcgactcgat
gtatacggacgcaagggcgaaacttgccgccagtgcggaaccccaattacgaagacggtc
gttgggggaagaggtacacatttctgttctgtatgccaaaaataa
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