Halalkalibacterium halodurans: BH3153
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Entry
BH3153 CDS
T00039
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03030
DNA replication
bha03410
Base excision repair
bha03420
Nucleotide excision repair
bha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BH3153 (polA)
03410 Base excision repair
BH3153 (polA)
03420 Nucleotide excision repair
BH3153 (polA)
03440 Homologous recombination
BH3153 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bha03032
]
BH3153 (polA)
03400 DNA repair and recombination proteins [BR:
bha03400
]
BH3153 (polA)
Enzymes [BR:
bha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BH3153 (polA)
DNA replication proteins [BR:
bha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BH3153 (polA)
DNA repair and recombination proteins [BR:
bha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BH3153 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BH3153 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_polI_exo1
5_3_exonuc
HHH_5
HHH_2
Pyr_excise
RickCE_N
Motif
Other DBs
NCBI-ProteinID:
BAB06872
UniProt:
Q9K854
LinkDB
All DBs
Position
complement(3267208..3269838)
Genome browser
AA seq
876 aa
AA seq
DB search
MKKLVLIDGNSIAYRAFFALPLLNNDKGVYTNAVYGFTMMLLKVLEDEKPTHMVVAFDAG
KTTFRHDTYDAYKSGRQKTPPELSEQFPLIRELLDAFNIARVEVENFEADDLIGTLAKQA
SQENFEVKIFTGDKDLLQIVSDHVTVALTRKGITQIDVYDEKGIEERYGITPEQIIDMKG
LMGDSSDNIPGVPGIGEKTALKLLKEYGSVEKVLESIDEISGKKMKERLEEHRDQALMSK
KLATIYLEAPVTLDADSFTFGEYDKKEVVKLFKELDFNSLLDKVDADGEGIEKEELQSLN
YETLREVKEAHLADKAALVVEVLDENYHQGDILGLAIAHNNGCYYIPTDEALRSEALIQW
LKDERKEKWLFDAKRAVVALGWKNIELAGSTFDLQMASYLLDPSTSFHEVSDVTKHHRKG
HVHEDEAVYGKGAKRRIPDEKELGEHLARKADAIFQLKEHVEEKLKENEQLGLFNELEMP
LSVILGRMETTGVKVDVEQLEQMGEDLNARLEELEQTIHELAGVSFNINSPKQLGEILFE
KLQLPVIKKTKTGYSTSADVLEKLAGQHEIIDHILHYRQLGKLNSTYIDGLLKVVHKGTG
KVHTRFNQALTQTGRLSSTDPNLQNIPIRLEEGRKIRKAFVPSEKDWFILAADYSQIELR
VLAHFAEDEKLMEAFREDMDVHTKTAMDVFHVSQEEVTSNMRRSAKAVNFGIVYGISDYG
LSQNLGITRKEAATFIERYFASYPKVKEYLDHVIDEAREKGYVTTLLKRRRYLPDLTSRN
FNQRSFAERTAMNTPIQGTAADIIKQAMVQMASRMDEEDLQSRLLLQVHDELIFEVPKEE
VAQMKELVTSVMEQAVELRVPLKVDVACGDTWYDAK
NT seq
2631 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaaaactagtactgatcgatggaaatagtattgcgtatcgcgcattttttgcattg
ccattgcttaataacgataaaggtgtttatacgaatgccgtgtatggatttacaatgatg
ctgttaaaggtgttggaagacgaaaagccaactcacatggttgttgcttttgacgcgggt
aagaccacatttaggcatgatacatatgatgcgtacaaaagtggaaggcaaaaaacgccg
ccagagctttcagagcaatttccgctcattcgcgagctcttggatgcgtttaacattgcc
cgtgttgaagtggaaaactttgaagcggacgatctcatcggtacattggcaaaacaggcg
agtcaagaaaactttgaagtgaaaatctttaccggtgataaagacttgttgcaaatcgtg
tctgaccatgtgacggtcgctttgacgagaaaaggaattacacagattgatgtctatgat
gaaaaaggcattgaagaacgatatggaattacaccagagcagattattgatatgaaaggt
ctcatgggggatagttcggataatattccgggcgttccaggcatcggagaaaagacagcg
ctgaaattgttaaaggaatatggttcggttgaaaaagtactagagtccatcgacgaaatt
tcagggaaaaagatgaaggagcgactggaagaacatcgtgaccaagcccttatgagcaag
aagttggcgacgatttatctggaagccccagtgacgctggacgcagattcgtttacgttt
ggtgaatatgataaaaaagaagttgtgaaattgttcaaggagcttgattttaactcattg
ctcgacaaagtcgatgcagacggagaagggattgaaaaggaagaactccagtctttgaac
tatgaaacgcttcgtgaggtaaaagaggcgcatttagcggataaagctgcccttgttgtg
gaagtgttggatgagaactaccatcaaggcgacattttagggctggcgatcgcccataac
aatggttgctattacattccaacagatgaagctctccgatcggaagcgcttattcaatgg
ttaaaggatgaacgcaaggagaagtggttgtttgatgcgaagcgtgcggtcgttgcgtta
ggctggaaaaacattgaactagctggtagtacatttgacttgcaaatggcctcctattta
ttagacccgtccacatcgtttcatgaagtgagcgatgtgacgaaacatcaccgtaaaggt
cacgtgcatgaagatgaggcggtttatgggaaaggggctaaacgccggattcctgacgag
aaagagctaggagaacacctggcgcggaaagcggacgcgatttttcaattaaaggagcac
gttgaagagaagctgaaagaaaatgagcagctagggttgttcaacgaattggagatgccg
ctttcggtcattttaggacgaatggaaacaacaggtgtaaaagtcgatgttgagcagctt
gagcaaatgggtgaggacttaaatgctcgtcttgaggagcttgagcaaacgattcacgaa
ttagccggtgtctcatttaatattaactcccctaagcaattgggtgaaattttatttgag
aagttacagcttccagtcattaaaaagacgaagacagggtattcaacgtctgctgatgtg
ttagagaagctagctgggcaacacgagatcattgatcacatacttcactatcggcagctc
ggtaagctaaattctacgtatattgacggattgctgaaagttgttcacaaggggactggg
aaggttcatacccgcttcaatcaggctctaactcaaaccggtcgcttaagctcgacagat
ccgaatttacaaaacatcccgattcgcttagaggaaggacgtaaaattcgcaaagccttc
gttccatcggaaaaggactggttcattcttgctgctgattattcgcaaattgaattgcgc
gtccttgcccattttgccgaagatgaaaagcttatggaagcgttccgtgaagatatggat
gtccacacgaaaacggcgatggacgtatttcatgttagccaggaagaagtaacgtccaac
atgcgtcgcagtgcgaaagcggtcaacttcggaattgtgtatggcattagcgattatgga
ctgagccaaaaccttggcatcactaggaaggaagcggcaacgttcatcgagcgttatttt
gctagctacccgaaggtaaaggagtacctcgatcacgtcatcgatgaagctcgagagaag
ggttatgtgacaacactgttgaagcgccgccgttatttgcctgacttaacgagtcgcaat
ttcaatcaacgtagctttgcagagcgtacagccatgaacacaccgatccaaggaacagct
gctgacattataaagcaagcgatggttcagatggcgagtcggatggacgaagaagacttg
caaagccgattactgttgcaagtgcatgacgaattaatttttgaggtgccgaaggaagaa
gtggcgcaaatgaaagagcttgtgacttctgttatggagcaagctgtggaattacgcgtg
cccctaaaggtggacgtggcttgcggtgacacatggtatgatgcaaagtaa
DBGET
integrated database retrieval system
