Halalkalibacterium halodurans: BH3169
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Entry
BH3169 CDS
T00039
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bha
Halalkalibacterium halodurans
Pathway
bha03030
DNA replication
bha03430
Mismatch repair
bha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BH3169 (dnaE)
03430 Mismatch repair
BH3169 (dnaE)
03440 Homologous recombination
BH3169 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bha03032
]
BH3169 (dnaE)
03400 DNA repair and recombination proteins [BR:
bha03400
]
BH3169 (dnaE)
Enzymes [BR:
bha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BH3169 (dnaE)
DNA replication proteins [BR:
bha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BH3169 (dnaE)
DNA repair and recombination proteins [BR:
bha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BH3169 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
BAB06888
UniProt:
Q9K838
LinkDB
All DBs
Position
complement(3286939..3290289)
Genome browser
AA seq
1116 aa
AA seq
DB search
MESVHIHVHSEYTLLSSMCRIPALVEKAKAAQFSALALTDRHVMYGAVPFYKACKESGLK
PIIGMETTVRFAEDRESDLLLYARSNKGYEHLLKLSTIIQCREEKEKYVTWEELLAYKDD
LLYVIPYSGGFVRACLEDEALERGERFIQFLKDHLGGESVYLEIQGTDRSKVEPINQLAA
KLAIPLVCSQHIQVLEREDLDAWKVIQAIREGVLVEELRIEQEEDVCFFTLTEMEQTFRA
YPEALQNTKKLADRCHVELTLGKPRLPKFQTPNEQSAEDYLRKLCEQGAKERYGEEWTKE
KAQRLGEELAVIERMGFSDYFLIVWDFMRFAREASIVTGPGRGSVAGSLVAYVLFITDVD
PLHYDLLFERFLNPERISLPDIDLDFPDHRREEVIVYVKKKYGANRVAQILTFGTLAARA
SVRDVGKALAIPPNVIEKISKEISGRPGMTLVKAYNENERLRQLVHASDEAQKVMKLARK
VEGLPRHTSTHAAGVVISEQPLTEVIALQHGQGEVPLTQGTMETVEDVGLIKMDFLGLRN
LTLLEMVVKRVRETYGHSLNVKQLPLNDAKTFALLAKGETTGVFQLESGGMRKVLRELKP
NTFADIVAVNALYRPGPMEFIPDYIQGKEGTKEITYLHPDLEPILSSTYGVIVYQEQIMQ
IAAKMAGFSLGEADLLRRAISKKKGEALRQQEEAFVTGAVRQGYEQETAKKIYELIVRFA
NYGFNKSHAVAYSMLAYQLAYLKAHYPSSFYAALASTIWNQPEKLERLLQEMKQQGIRVL
PPSLSKSDIHFSEEEEGVRFPLLPLRYVSVRAIRELIKARREAPVRSLFDLCSRVDGRIV
TSRVMESLIKAGALDELGERATLLANIEEAFQFAEQVKEFQENTGGLFQLSVEEPEYIKV
EPLTDLEKLAYEKEAVGFYLSGHPLLAYTESLRQYDRLTYLEGTERRFVKLAGMIHRIRR
IRTKRGEVMGFLTMSDETGEWEAVVFPAVWAMYEWGLKEGELYFVEGKMDRGRSEELQLL
VDKVLPLKHMLKKEKEKLFLKITADVEKEVERLNDIRRLLQVHHGPTPVVMYYEKQRKTI
QLPEKYHVSLSFTLLHELEQLVGKEHVVVSTYEDES
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
atggaaagtgttcatatacacgtacatagtgaatacacccttctctcaagcatgtgtcgg
attccagcactagtagaaaaggcaaaagcagcccagttttctgcattggcattaaccgat
cgccatgtcatgtatggggctgttcctttttacaaagcttgtaaagaatcaggattgaaa
ccgattatcgggatggagaccaccgttcgatttgcagaggatcgagagagtgaccttctc
ttatatgcccgctccaataaagggtatgagcaccttttgaagctttcaacgatcattcaa
tgccgcgaggaaaaagaaaaatatgtgacgtgggaagagcttctcgcatataaggacgac
ttgttgtacgtcattccatattcaggaggatttgttcgggcttgtctcgaagatgaagcg
ctagaacgaggagagcgatttatccagtttctcaaagatcatcttggaggggaatccgtt
tatttagaaattcaaggcacggaccgttctaaagttgaaccgatcaatcaattggcggca
aagctagcgattccccttgtgtgcagtcagcatattcaagtattagagcgagaagattta
gacgcgtggaaagtgattcaggcgattcgcgaaggtgttctcgtagaagaattaagaatc
gaacaagaggaggatgtttgctttttcacgttgactgagatggagcaaacgtttcgagct
tatccagaagcgttgcaaaatacgaaaaagctagccgatcgttgccatgttgaacttacg
cttggtaagccaaggttaccgaaatttcaaacgcctaatgaacaatcagctgaggactac
ttgcgcaagctttgtgagcaaggggcgaaagagcgatatggggaagaatggaccaaagag
aaggcgcaacgcttaggagaagaattggccgttattgagagaatgggctttagcgattac
tttttaatcgtgtgggattttatgcgattcgctcgggaagcgtcgattgtaacagggccg
ggaagaggttctgtcgccggctcattagtggcgtacgtgttatttattaccgacgtagac
ccgctccactatgatttactgtttgaacgtttcttaaatccagaacgtatttccttgcct
gacatcgatcttgacttccctgatcatcgccgcgaagaagtgattgtttacgtgaagaaa
aagtacggggcgaatcgagtagcgcaaattctcacattcggtacgttggctgcaagagcc
tcggtacgtgatgtaggaaaggcactcgcgatcccgccaaacgtcattgaaaaaattagc
aaagagatttccggtagacctgggatgacattggtaaaagcttataatgagaacgaacgg
ctccgacagctcgtgcacgcttccgatgaggcgcaaaaagtgatgaagctcgcgcgcaag
gtagaggggctgccgcggcatacgtctacccatgcagccggggtcgtgatcagtgaacag
ccgttgacagaggtcattgctttacagcatgggcaaggagaggtgcctctcacgcaaggg
acgatggaaacagtcgaggatgttggcttaattaaaatggattttcttggattgcgtaat
ttgacattgctagaaatggtcgtcaagcgagtgagggaaacgtacggtcattctcttaat
gtaaagcagctccccttaaacgatgcaaaaacattcgccttacttgccaagggggaaacg
acaggtgtctttcagctagaatctgggggaatgcggaaagtgctacgtgagttaaagcca
aatactttcgcagatattgtcgctgtcaacgccctctacagaccagggccgatggagttt
atacctgattacattcaaggaaaagaagggacaaaggaaattacttatctccatccagac
ttagagccgattttaagctcaacatatggtgtcattgtttatcaggaacaaattatgcaa
atcgccgcaaaaatggctggctttagtttaggtgaggccgatttgctgcgacgagcaata
agtaagaaaaagggagaagcgttacgccagcaagaggaggcatttgttacgggagccgtc
cgccaaggctatgagcaagagacggctaaaaaaatatatgagctgatcgttcgttttgcc
aactatggatttaataaaagccatgcagttgcctacagcatgcttgcctatcagcttgcc
tatttaaaagcccattatcctagctcattttacgcggcgcttgcctcaaccatttggaat
caacctgaaaaactggaacggctccttcaagagatgaagcaacaaggaatccgagtgctt
cctccttccctttcgaaaagtgatatccattttagcgaagaggaagaaggggtccgcttc
ccacttttaccgttgcgctatgtgagtgttcgagcgatccgcgaacttatcaaggcacga
cgtgaagcgcctgttcgcagtctgttcgacctgtgctcgcgagtagatggccgtatcgtt
actagccgagtgatggaaagtctgattaaagcaggagctcttgatgagctgggggagcga
gctacccttctagccaacattgaagaagcctttcagtttgctgaacaagtgaaagagttc
caagaaaatactggggggctgtttcagctaagtgtagaagagccagagtatataaaggta
gagcccttgaccgacttagaaaagctagcttatgaaaaggaagcagtcgggttttatctt
agtggtcatccactgcttgcctataccgaatcgctcaggcaatatgatcggttaacatat
ttggaaggaaccgagcgacgttttgtaaaattggcaggcatgatccatcgaattcgccgg
attcgaacaaaacgcggtgaggtgatgggttttctcacgatgagcgatgaaacaggggaa
tgggaagctgttgtttttccggccgtttgggcgatgtacgaatggggattaaaggaaggc
gagctttattttgtcgaaggaaagatggatcggggccgctccgaagagctgcagctatta
gtcgataaagttttgccactaaagcacatgctaaaaaaagaaaaggaaaagctgttttta
aaaataacggcagacgttgagaaagaagtggaacggttaaacgatattcggcggttgctt
caagtccaccatggcccaacgcctgttgtcatgtactacgagaaacaaagaaaaacgatt
cagctcccggaaaaatatcacgtttccctctcctttacactcttacatgaactcgaacaa
ttagtcggaaaagaacatgtcgttgtgagcacatacgaggatgagagctga
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integrated database retrieval system
