Halalkalibacterium halodurans: BH3356
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Entry
BH3356 CDS
T00039
Symbol
hbs
Name
(GenBank) non-specific DNA-binding protein II (HB) (HU)
KO
K03530
DNA-binding protein HU-beta
Organism
bha
Halalkalibacterium halodurans
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bha03032
]
BH3356 (hbs)
03036 Chromosome and associated proteins [BR:
bha03036
]
BH3356 (hbs)
03400 DNA repair and recombination proteins [BR:
bha03400
]
BH3356 (hbs)
DNA replication proteins [BR:
bha03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
BH3356 (hbs)
Chromosome and associated proteins [BR:
bha03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
BH3356 (hbs)
DNA repair and recombination proteins [BR:
bha03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
BH3356 (hbs)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
BAB07075
UniProt:
Q9K7K5
LinkDB
All DBs
Position
3471792..3472064
Genome browser
AA seq
90 aa
AA seq
DB search
MNKTELIHQVAERTQMSKKDAGEVVNTVFDVIAESLAQGDSVQLIGFGNFEVRERAARKG
RNPQTGEEIDIAATKTPAFKAGKQLKDAVK
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaacagaacttatccatcaagtggcagaacgtacacagatgtcaaaaaaagat
gctggtgaagttgttaacactgtatttgatgtcattgctgaatcccttgcccaaggtgac
tctgtacaactgatcgggttcggaaactttgaagtgcgtgaacgtgccgcacgaaaaggt
agaaatccacagactggagaggaaattgacattgccgcaacaaaaacaccagcgttcaaa
gcgggaaagcagctgaaagatgcagtgaagtaa
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