Halalkalibacterium halodurans: BH3944
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Entry
BH3944 CDS
T00039
Symbol
rocR
Name
(GenBank) transcriptional activator of arginine utilization operons
KO
K06714
arginine utilization regulatory protein
Organism
bha
Halalkalibacterium halodurans
Brite
KEGG Orthology (KO) [BR:
bha00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
bha03000
]
BH3944 (rocR)
Transcription factors [BR:
bha03000
]
Prokaryotic type
Helix-turn-helix
Other families
BH3944 (rocR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
HTH_8
AAA_5
PAS_4
PAS_9
AAA_3
HTH_50
HTH_30
AAA_2
ATPase
AAA_16
AAA
MCM
AAA_7
AAA_19
HTH_24
DUF815
AAA_32
HTH_AsnC-type
PAS
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BAB07663
UniProt:
Q9K5Z1
LinkDB
All DBs
Position
4082135..4083574
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AA seq
479 aa
AA seq
DB search
MERIGNLPLSQQRIIYETIMNEIDVGIHVIDTFGQTIIYNKKMMEIESLTKEDVENKDFL
DIFMFEEGQGSTLLEALYKKKHSKDVKQTYFNNRGKEITTINNTFPLYENGQVIGAIEIS
KDVTKLERLIRKNMESKGNTRYTFDSIIGESTAIREVIENTKRATRTASSVLIVGETGTG
KELFAQSIHNGSDRSKGPFISQNCAAMPETLIESLLFGTKKGAYTGAIERPGLFEEAEGG
TLLLDEINSLSPPLQAKLLRAIQEKQIRRVGDTVDRKVNVRILSTINEDPIEAIASGRLR
KDLYYRLGVVTLFIPPLRERKEDIVPLVDHFIAKYNERFQMEVKGLSDEVTQLLLQYDWP
GNVRELEHIIEGAMNLMIGEDLIDVRHLPFHFRQKSLSAPLSSQITSVYETGPSDAIEHS
VEEQQPLRDLKDYLLEAEKMYIKKALERNKYHVTKTAEKLGLSRQSLQYRMKRLGISAK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atggaacgaatcggaaacctccctctgtcgcagcaacgaattatctacgaaacgatcatg
aatgaaatcgacgttggcattcatgtgattgatacgttcggacagacgatcatttataat
aaaaagatgatggaaattgaatcgctgacaaaagaggatgtagagaacaaagatttttta
gacatcttcatgtttgaggaaggacaaggtagcaccttattagaagcactctacaaaaag
aagcactctaaagatgtaaagcaaacgtattttaataatagagggaaagagattacgacc
attaataacaccttccctctctatgaaaatggccaggtgatcggggcgatcgaaatttcg
aaggacgtcacgaaattagagcggctcattcgaaaaaacatggagagtaaaggcaatacc
cgctatacctttgacagcattattggagaaagcacggctatccgtgaagtaattgaaaat
acaaagcgagcgactcggactgcttcttccgtcctcatcgtcggcgaaacagggacggga
aaagaattatttgcccaaagcattcacaatggaagcgatcgttccaaagggccattcatt
tcacaaaactgtgccgccatgccggaaacgttaatagaaagcttgttattcggaacgaaa
aaaggcgcctatacgggggcaattgaacgtcccggcttatttgaggaagctgaggggggc
acattgttgcttgatgaaattaactctcttagcccacccctacaagcaaagctgttacgg
gcgattcaagaaaagcaaattcgtcgtgttggggacacggtcgatcgcaaagtgaacgtt
cgaattctttccacgattaacgaagatccaattgaagcaatcgcaagcgggcgtctgcga
aaagacttgtattaccggctaggcgtggtcaccctcttcattcctcctttgcgggaacgg
aaagaggacattgtccctctcgttgaccattttatcgcaaaatacaatgagcggtttcaa
atggaagtgaaggggcttagcgatgaagtcacacaattactcctacagtacgattggcct
ggaaacgttcgcgaactggagcacatcattgagggcgcgatgaacctgatgatcggtgag
gacctaattgatgtgcgacatttaccgttccactttcgccaaaaatctctttcggctccc
ctttcctcgcaaatcacaagcgtctacgaaacgggtccctctgacgccatagaacactca
gttgaggaacaacagccgttacgagacttgaaagattatttacttgaagccgaaaaaatg
tatattaaaaaagcgctcgaacgaaacaaataccatgtgacgaagaccgctgaaaagcta
ggcttaagccggcaaagcttacaatatcggatgaagcggttaggcattagcgcaaagtaa
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