Bacillus haikouensis: KJK41_00700
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Entry
KJK41_00700 CDS
T08945
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
bhai
Bacillus haikouensis
Pathway
bhai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
bhai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
KJK41_00700 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhai03021
]
KJK41_00700 (rpoC)
03400 DNA repair and recombination proteins [BR:
bhai03400
]
KJK41_00700 (rpoC)
Enzymes [BR:
bhai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
KJK41_00700 (rpoC)
Transcription machinery [BR:
bhai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
KJK41_00700 (rpoC)
DNA repair and recombination proteins [BR:
bhai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
KJK41_00700 (rpoC)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
EF-hand_STIM1
Motif
Other DBs
NCBI-ProteinID:
QWC22967
LinkDB
All DBs
Position
139817..143416
Genome browser
AA seq
1199 aa
AA seq
DB search
MLDVNNFEYMKIGLASPDKIRSWSYGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTKAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEVIYFASYVVTEPGDTALEKKQLLSEKEYRAYREKYGVKFQAAMGAEAIKKLLQ
DIDLDKEADFLKEELKTAQGQRRTRAIKRLEVVESFRNSGNDPDWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVQPEVWDVLEEVIKEHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARMLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREDAVGEGMVFSDANEVLLAYQNGYVHLHTRIGIN
AGTLHNKTFTEKQNSQMLLTTVGKVIFNEILPDSFPFINEPTKTNLEEVTPEHYFVEPGT
DIKEEFKNRELINPFKKGFLGNIIAEVFKKFAITETSRMLDKMKDLGFKYSSKAGITVGI
ADIVVLAEKEQILVEAQSKVDNVLKQFKRGLITEDERYDRVISIWSAAKDTIQGKLMATL
DKRNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREEDCGTDRGLLVGSIKEGTEIIEPLE
ERLLGRYSRKTLRHPETDEILVDENQLITEDLAKMIVDAGIEHVSIRSAFTCNTRHGVCE
KCYGTNLATGQKVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEMDGVITSIGEGKDRQYEITVQGDVETRSYTAPYTARLKFGVNDKVAR
GQELTEGSIDPKELLKVRDVSAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMLRKVRV
IDAGETEVLPGTLMDIHQFRDANEKALLDGSIPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRKAEPVLAEENTEETVTVE
NT seq
3600 nt
NT seq
+upstream
nt +downstream
nt
ttgctagatgtaaataactttgagtatatgaaaattggtttagcttcccccgataagatc
cgttcgtggtcttacggggaagtcaaaaaaccggaaaccatcaactatcgtactttaaag
ccggaaaaagacggcttgttctgtgaacgtattttcggtccgacaaaggactgggagtgc
cactgtggtaaatacaagcgcgtacgttataaaggcgtcgtttgtgaccgctgtggtgtt
gaagtgacaaaagcgaaagtccgccgtgaacgcatgggtcacatcgaacttgccgctccc
gtttcacatatctggtacttcaaaggaatcccaagtcgtatgggtcttgttttggacatg
tccccccgcgcattggaagaagtcatttacttcgcttcctatgtagtaacagaacctggt
gatacggctcttgagaagaagcagctgctttctgaaaaagagtaccgtgcttaccgtgag
aagtatggagttaagttccaggcggcaatgggtgcagaagcgatcaaaaaactccttcag
gatatcgatcttgacaaagaagccgatttcttgaaagaagagctgaaaacagcgcaaggt
cagcgacgcacacgtgccatcaagcgtcttgaagtggtcgagtcattcaggaattcagga
aatgatcctgactggatgatccttgatgtacttcctgtcatccctcctgaacttcgtcct
atggttcagctggatgggggacgttttgcaacatctgatttgaacgacttatatcgtcgt
gtcatcaaccgtaacaaccgtttgaaacgtttattagatcttggtgccccaagcataatc
gtgcagaatgagaagcgtatgcttcaagaagcagtagacgctctgatcgataacggccgc
cgcgggcgtccggtaacaggaccaggtaaccgtccattgaaatctctttctcacatgctt
aaagggaagcagggtcgtttccgtcaaaaccttcttggtaagcgtgttgactattcaggc
cgttctgtaatcgttgttggtccaaacctgaaaatgtaccaatgtggtcttccaaaagaa
atggcacttgaattattcaagccatttgtcatgaaagaactcgttgaaaaagggttggct
cacaacatcaagagtgcaaaacgcaaaattgaacgcgtgcagccggaagtatgggatgtt
ttagaagaggtaatcaaagaacaccctgttctattgaaccgtgcacctacccttcacaga
cttggtattcaagcctttgaaccaactcttgtcgaaggccgtgcgatccgtcttcacccg
ctcgtatgtactgcatacaacgcggactttgacggtgaccagatggcggtccacgtaccg
ttgtcttctgaagcacaggctgaagcgcgcatgcttatgcttgccgctcagaacatcctg
aaccctaaagacggtaaacctgttgttacaccatcacaggatatggtactgggtaactat
taccttactcttgaacgtgaagatgctgtcggcgaaggcatggtcttctctgatgcaaat
gaagtactgcttgcttatcaaaatggatatgtacacttgcatacacgtattggaatcaat
gcaggaacacttcataacaaaacgttcactgaaaagcaaaacagccaaatgctattaacg
acggttggtaaagtaatcttcaacgaaatcttgccggactccttcccgttcattaatgaa
ccgacaaagacgaacctggaagaagtaactccagaacattactttgtagagcctggtaca
gacatcaaagaagaatttaaaaaccgtgagttgatcaatccgttcaaaaaaggtttctta
ggaaacatcattgcagaagtattcaagaagtttgcgatcaccgaaacttcaaggatgctc
gataaaatgaaagacttaggattcaaatattcttcgaaagcaggtattacggtcggtatc
gccgacatcgttgtattggctgaaaaagaacagatcctggttgaagcacaaagtaaagta
gacaacgtattgaagcaattcaaacgtggtctgattacagaagatgagagatacgaccgt
gtcatctcgatctggagtgctgcgaaagatacgatccaaggtaagctgatggctaccctt
gataaacgcaacccgatcttcatgatgagtgactcaggtgcccgtggtaacgcatctaac
ttcactcagcttgccggtatgcgtggtctgatggccaacccggctggacgtatcattgaa
ttaccgatcaaatcaagtttccgtgaaggtctgacggtccttgaatacttcatctctacc
cacggtgcccgtaaaggtcttgccgatacagcactgaagacagccgactcaggatatctg
acacgccgtcttgtagatgtggcccaggatgtcatcgtacgtgaggaagactgtggaact
gacagaggacttctcgtcggctccatcaaggaaggcaccgagatcatcgagcctcttgaa
gagcgtcttctcggccgttactcacgcaagacattgcgtcaccctgaaacagacgagatt
cttgtcgatgagaaccagctgatcacggaagatttggctaaaatgatcgtagatgcagga
atcgaacacgtttcgatccgttctgcattcacatgtaacacccgccacggtgtatgtgag
aaatgttatggaacgaaccttgctactggtcaaaaagtagaagtgggagaagcagtcggt
atcatcgctgcacaatccatcggggaacctggtacacagcttacaatgcgtacattccat
accggtggtgttgcaggggacgatatcacccaaggtttaccgcgtatccaagagatcttc
gaagcgcgtaaccctaaaggtcaggctgtcatctctgaaatggacggtgtcattacttcc
atcggtgaaggaaaagaccgtcaatatgaaatcactgtccaaggtgatgtcgaaacaaga
agctatacagctccttatacagctcgcctcaagttcggtgtcaacgataaagttgcccgc
ggacaagagcttactgaaggttcgatcgatccgaaagaattacttaaagtacgtgacgta
tctgccgttcaagaatacttgctgcgcgaagtacaaaaagtatatcgtatgcaaggggtt
gaaatcggcgataagcacgtagaagtaatggttcgtcaaatgcttcgaaaagttcgcgtg
atcgacgctggtgaaactgaggtacttccaggtactcttatggacattcatcagttcaga
gatgcgaatgaaaaagcattgcttgatggaagcatcccggcaacaggcagacctgtattg
ctcggaatcacaaaagcttcccttgagacggattccttcttatctgcagcttcattccaa
gaaacaacccgcgtgttgacggatgctgcaattaaaggaaaacgcgatgagcttctagga
ttgaaagaaaatgttatcatcggtaaactggttcctgctggtacaggtatgcagcgttac
cgcaaggcagaacctgtcctcgccgaagaaaacacggaagagacagtgactgtagagtaa
DBGET
integrated database retrieval system
