Bacillus haikouensis: KJK41_01265
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Entry
KJK41_01265 CDS
T08945
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bhai
Bacillus haikouensis
Pathway
bhai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KJK41_01265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhai03019
]
KJK41_01265
03009 Ribosome biogenesis [BR:
bhai03009
]
KJK41_01265
Enzymes [BR:
bhai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KJK41_01265
Messenger RNA biogenesis [BR:
bhai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KJK41_01265
Ribosome biogenesis [BR:
bhai03009
]
Prokaryotic type
rRNA helicases
KJK41_01265
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Helicase_RecD
AAA_30
AAA_19
GRP
Motif
Other DBs
NCBI-ProteinID:
QWC24791
LinkDB
All DBs
Position
241618..243072
Genome browser
AA seq
484 aa
AA seq
DB search
MGFEEATPIQASTIPAGLEGKDIIGQAQTGTGKTTAFGIPMIEKIDMKNPNVQALVIAPT
RELAIQVSEELYRIGADKRARVLSVYGGQDIQRQIRAMKKNPHIIVGTPGRLLDHIKRRT
LKLDNVETLVLDEADEMLNMGFIEDIESILETVPSTRQTLLFSATMPDPIRRIAERFMTE
PELIKVKSKEVTVSNIEQYFTKVTEKEKFDVLSRLIDVQSPELAIVFGRTKRRVDELSRA
LSIRGYLAEGIHGDLSQARRMTVLKKFKEGRIDILIATDVAARGLDISGVTHVYNFDIPQ
DPESYVHRIGRTGRAGKKGMSITFVTPREMGYLRVVEQTTKKKMMGLKPPSHNEALEGQQ
RLALEKLIEAAKENDIKDYYQFAEEFLNDQDPIQAVAAAIKVLTKEPDTTPVEITEERPL
PSRGGGGNRGGYKGGSRSGKGGGRGGSGGPRGGGSRGGSSRGGDRRGGGRPQSSGSRRKS
YNNN
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgaagaagcaaccccaattcaggcaagtacaatcccggcaggtcttgaaggc
aaggatatcatcggccaggcacagacaggaacaggtaaaacgactgcattcggtatcccg
atgatcgaaaagatcgatatgaagaacccgaacgtccaggctcttgtcatcgctccgaca
cgtgaacttgcgatccaggtttctgaagaattataccgcattggagcagataagcgtgca
cgcgtattatctgtatacggcggacaggatatccagcgccagatccgtgcgatgaaaaag
aacccgcacatcatcgttggtacaccaggacgtcttctcgaccatatcaagcgccgcacg
ctgaagcttgataacgttgaaacgcttgttcttgacgaagcggatgaaatgctgaacatg
ggcttcatcgaagacatcgagagcatccttgaaactgtaccgagcacaagacagacactt
ctgttctctgcaacaatgccggatccgatccgccgcatcgcagaacgcttcatgacagaa
cctgaattgatcaaggtgaaatcaaaagaagtgacagtttcaaatatcgaacagtacttc
acaaaagtaacagaaaaagaaaagttcgatgtattgtcccgtctgatcgacgtgcaatca
ccagaacttgcgattgtattcggacgcacaaagcgccgtgttgacgaactgtcccgtgca
ctcagcatccgcggctaccttgcagaaggaatccacggagacctttcacaggcacgccgt
atgacggttcttaagaagttcaaagaaggccgcatcgatatcctgatcgcaacggacgtt
gcagcccgcggacttgatatctccggcgtaacacacgtatacaacttcgatatcccgcaa
gatcctgaaagctacgttcaccgtatcggacgtacaggtcgtgcaggcaagaagggtatg
tccatcacattcgtaacaccaagagaaatgggttaccttcgtgtagttgaacaaacaacg
aagaagaaaatgatgggccttaagccgccaagccataacgaagcactagaaggccagcag
cgtcttgctttggaaaagctgattgaagcggcaaaagaaaatgacatcaaggattactac
caatttgctgaggaattcctgaatgatcaagatccaattcaggcagtggcagcagcgatc
aaagtccttacaaaagagccggacacaactcctgtagaaatcacagaagagcgtccattg
ccatctagaggcggcggcggtaatcgcggcggctacaaaggcggatcacgcagcggcaaa
ggcggcggacgcggaggcagcggcggcccacgcggcggtggttcacgcggtggatcatcc
cgtggcggcgatcgtcgcggcggcggcagaccgcaatcatcaggcagccgacgcaagtct
tataataataactaa
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