Bacillus haikouensis: KJK41_03220
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Entry
KJK41_03220 CDS
T08945
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
bhai
Bacillus haikouensis
Brite
KEGG Orthology (KO) [BR:
bhai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
bhai03009
]
KJK41_03220 (rlmD)
Enzymes [BR:
bhai01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
KJK41_03220 (rlmD)
Ribosome biogenesis [BR:
bhai03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
KJK41_03220 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
Cons_hypoth95
Methyltransf_25
MTS
UPF0020
Methyltransf_11
Ubie_methyltran
PrmA
Methyltransf_32
Motif
Other DBs
NCBI-ProteinID:
QWC23400
LinkDB
All DBs
Position
649385..650791
Genome browser
AA seq
468 aa
AA seq
DB search
MKKQYTNKRQGNNNEVKIELKQQFPLTIKKIGINGEGIGFFKRKIVFVPGALPGEEVVVE
VTKVHPKFTEARIKKIRKKSPQRTKAPCLVYEECGGCQLQHITYEGQLEAKRDIVLQSLE
RHTKLNLDELDLRQTIGMDNPWHYRNKSQFQVESHKGKAFAGLYSMNSNKLINIDECIVQ
HSATNKVTTEIKRIINDFNIPVYDEKKKKPILRTIVTRVGFETGQVQVVLVTNDKKIQRK
DLLISEIEKRLPEVVSIAQNINPKKTGIIFGDETIHLSGKESIEERLDEFTYELSARAFF
QLNPIQTTKLYNEAKKAAALTGEEKVVDAYCGVGTIGLWLADGAKEIRGMDVIKEGIDDA
KKNAERFGVDHADYFVGSAEELMPKWKKEGWRPDVVVVDPPRTGCDQKFLDTIKEVKPKK
FVYVSCNPSTLAKDIEYLKKQYTVEYLQPVDMFPQTAHVECVAKLVLK
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagcaatacacgaataaacggcaaggcaacaataatgaagtgaagatcgagctg
aaacagcagtttccgcttacgataaaaaagatcggcatcaacggtgagggcatcggtttc
tttaaacggaaaatcgtcttcgtcccgggagccctgccaggggaagaagtggtggtcgaa
gtcaccaaggtgcacccgaaattcacggaagcacgaatcaagaaaatccgaaagaagtca
ccgcagcggacaaaggctccctgcctcgtttatgaagaatgcggcggctgccagcttcag
cacatcacgtatgaaggtcagctcgaagcaaagcgcgatatcgttctgcagtccctggaa
cgccatacaaaactgaacctggatgaactggatttacgtcagacgatcggcatggacaac
ccttggcactaccgcaacaagagccagttccaagtggaatcccataaagggaaagcattc
gcaggcctctacagcatgaactccaacaagctgatcaacattgacgaatgcatcgtccag
cactcggcaaccaacaaagtcacaacagaaatcaaacgcatcatcaatgacttcaacatt
cctgtctatgatgagaaaaagaaaaagccgatcctgagaacgatcgtgacgcgcgtcgga
ttcgaaacaggacaggtgcaggttgtactggtaacgaacgacaaaaagatccagcgtaag
gatttattgatttccgaaatcgagaaacgcctgccggaagttgtatcgattgcccagaac
atcaacccgaagaaaacgggcatcatcttcggcgatgaaacgatccatctttcaggaaaa
gaaagcatcgaagaacgccttgatgaattcacctatgaactttcagcacgtgcattcttc
cagctaaatccaatccagacgaccaagctttataacgaagcgaaaaaagcagcggctctg
accggtgaagagaaagtagtcgatgcatattgcggcgtcggcaccatcggactttggtta
gcggatggagctaaggaaatccgtgggatggatgtcattaaggaaggaatcgatgacgcc
aaaaagaacgctgaacgattcggagtcgaccatgcggattacttcgtaggcagcgcggaa
gaactcatgccgaagtggaaaaaagaaggatggagaccggacgtagtcgttgtcgatccc
ccgcgtacaggatgcgaccagaagttccttgatacaatcaaggaagtgaagccgaagaaa
tttgtgtatgtgagctgtaatccttctacgctggcaaaggatattgagtatttgaagaag
cagtacactgttgagtatttgcagccggtggatatgtttccgcagacggcgcatgtggag
tgtgtggcgaagttggttttgaaataa
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