Bacillus haikouensis: KJK41_13145
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Entry
KJK41_13145 CDS
T08945
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bhai
Bacillus haikouensis
Pathway
bhai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KJK41_13145 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhai03019
]
KJK41_13145 (recQ)
03400 DNA repair and recombination proteins [BR:
bhai03400
]
KJK41_13145 (recQ)
Enzymes [BR:
bhai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KJK41_13145 (recQ)
Messenger RNA biogenesis [BR:
bhai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KJK41_13145 (recQ)
DNA repair and recombination proteins [BR:
bhai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KJK41_13145 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
HTH_40
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Sigma70_r4_2
Myb_DNA-binding
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
QWC21274
LinkDB
All DBs
Position
complement(2641869..2644004)
Genome browser
AA seq
711 aa
AA seq
DB search
MENAHEILKQYFGYSEFRKGQDEIISNVLSGKNTAGIMPTGGGKSICYQVPSLLLEGVTL
VISPLISLMKDQVDSLTFQGIPATYINSTLSAAEVEERMEELSYGEYKLLYIAPERLESP
QFIRYLNSLEIPLVAVDEAHCLSQWGHDFRPSYMGIYDAVNQLSSHPVILALTATATPQV
QRDILNHLHIPSENKVLTGFQRNNLFFNVLKGEDRKRWIGQYVGRNSQQSGIIYCATRKE
VENVHDYLVKKGVPAGKYHGGLSDSLRLEQQESFLNDSIMVMVATNAFGMGINKSNVRYV
VHYQIPKNMEAYYQEAGRAGRDGVESECILLFSPQDIQTQRYIIDQNVMSPELHHNELQK
LRDMVDFVHTETCLQNYILSYFGEESEGECGHCSNCLDDRESEDVTVKAQMVLSCMIRMN
ERFGTSMISGVLTGSKGKKILDFRFDKLSTYGLLKGESQKEVGLFIDYLISEGIIDVEGG
SYPVLKVSSKGREVLIGERKVTRKKQVAPAPALSNEDELFQVLRDLRKAIAKEEGVPPFV
IFSDKTLHDMCLKQPSDEAGFLNVSGVGESKLERYGELFMKEIESFLNDNQGYTRKIEEE
PAESPTPRGKGQSDEPSHLVTFKMFSEDKDIKEIASARGMSTATIENHIIRSYEEGLLDD
WSRFFTEEEEALIESAVNKTGEKPLKPIKEELPDEISYFQIKGYLAKKRMQ
NT seq
2136 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaatgctcatgaaatactcaaacaatactttgggtactcagaattcagaaaaggt
caagacgaaatcatatccaacgtcttatcaggcaagaatacagccggtatcatgccaacc
ggcggagggaaatcaatttgttatcaagttccctcattgctgcttgagggcgtcaccctt
gtcatttctcctttgatttctttaatgaaagaccaggtcgattcgctgacattccaaggt
atacctgccacatacataaacagcacactcagtgcagccgaagtggaagagcggatggaa
gaactctcatacggagaatacaaactgctgtatatagcacctgaacggctggaatccccg
caatttatccgctatctcaattcattggagataccgctggtcgctgtggatgaagctcac
tgcttatctcaatggggacatgatttcaggcctagctatatgggaatctatgatgcagtg
aatcaactatcttcacaccctgtcatattggctttgaccgccacggcaacccctcaagtt
caacgtgatatcctcaaccatctgcatatcccctcagaaaacaaggtattgactggtttt
cagcgaaacaatcttttctttaatgtgttaaaaggtgaggacaggaaacgctggatcggt
caatatgtcgggaggaacagccagcagtcagggatcatctattgcgcaacccgcaaggaa
gttgaaaatgtgcatgattacttggtgaaaaagggagtgccggcagggaaatatcacggc
ggactgtccgattcgctcaggctcgaacagcaggaatcgtttttaaatgactccatcatg
gtaatggtcgccacgaatgcattcgggatggggatcaacaaatcaaatgtaagatacgtc
gttcattatcaaatcccgaaaaatatggaagcgtactatcaggaagccggccgtgccggg
cgggacggagtggaaagcgaatgcatcctgctcttttccccgcaggacatccagacccag
cggtacatcatcgatcagaacgtgatgagtccggaacttcatcataatgaattgcagaaa
ctgagggacatggtggattttgtgcatactgaaacctgccttcagaattatatcctttct
tattttggggaagagtctgagggtgaatgcggtcactgcagcaactgtctggatgatagg
gagtcggaggatgtcacggtcaaagcccagatggtgctttcatgcatgatccggatgaac
gaacgtttcggcacctccatgatcagcggcgtgctgaccggctctaagggaaagaaaatc
cttgatttcagattcgataagctgtcgacatacgggttgctgaagggagagtcgcaaaag
gaagtcggcctcttcattgactacttgatttcagaaggcatcatcgatgtagagggagga
agctatccggtacttaaagtctcaagtaaaggacgggaagttttaataggggaaaggaag
gttacacgcaagaaacaggtcgctcctgccccagccttatcgaatgaagacgaattattc
caggtcctgagggatttgagaaaagccattgcaaaagaggaaggggttcctccgtttgtc
atcttttcagacaaaacgctgcatgatatgtgcctgaagcagccttctgatgaagctggg
ttcctcaatgtcagcggagtcggagaaagtaaactcgaacgctacggtgaattattcatg
aaagaaatcgaatccttcttaaatgacaatcaaggctatacccgtaagattgaagaagaa
ccggctgaatccccaacaccaagggggaagggacaatcagacgagccatcccatttggtc
acgttcaaaatgttcagcgaagataaggatattaaagaaattgcttcagctcggggaatg
agtacggcaacgatcgaaaatcatattatccgctcctacgaagaagggcttttggatgat
tggagccgcttttttacagaagaagaagaagcactgattgaatcagcagtcaacaaaaca
ggcgaaaagcccctgaagccgataaaagaggaactgcccgacgaaatatcttattttcag
ataaagggatatctggcgaaaaagagaatgcaataa
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