Bacillus haikouensis: KJK41_15455
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Entry
KJK41_15455 CDS
T08945
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bhai
Bacillus haikouensis
Pathway
bhai02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bhai00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KJK41_15455 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhai03021
]
KJK41_15455 (rpoD)
Transcription machinery [BR:
bhai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KJK41_15455 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_1
Sigma70_r1_2
Exonuc_VII_L
HTH_20
DUF2316
DUF2408
Motif
Other DBs
NCBI-ProteinID:
QWC21706
LinkDB
All DBs
Position
complement(3083043..3084173)
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AA seq
376 aa
AA seq
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MAEKSARSKQIASELSVDQVKEFLVNQGKKRGVLTYEDIADKLSGFELDSDQMDEFYDHL
GEQGVEIINENEEDDDPGANELEKEEEEEFNLNDLSVPPGVKINDPVRMYLKEIGRVDLL
SAEEEINLAKRIEDGDEEAKRRLAEANLRLVVSIAKRYVGRGMLFLDLIQEGNMGLIKAV
EKFDYRKGYKFSTYATWWIRQAITRAIADQARTIRIPVHMVETINKLIRVQRQLLQDLGR
EPSPEEIAEEMDLTPEKVREILKIAQEPVSLETPIGEEDDSHLGDFIEDAEAQSPSEHAA
YELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRTLEEVGKVFGVTRERIRQIEAKALR
KLRHPSRSKRLKDFLE
NT seq
1131 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaaagtccgcgcgttccaaacaaatagcgtctgaattatctgttgatcaggtg
aaagaatttttagtaaaccaaggaaagaaaagaggcgtccttacttacgaggatattgct
gataagctgtccggatttgaattagactcagatcaaatggatgaattctacgatcactta
ggtgagcagggtgtagaaatcatcaatgaaaatgaagaagatgacgatccgggtgccaat
gaacttgagaaagaagaagaggaagaattcaacttaaatgatttaagtgttcctccggga
gttaagataaatgatcccgtcagaatgtatctgaaggaaatcggaagagtcgatctcctg
tcggcagaagaagaaatcaatcttgcgaaaagaatcgaagatggtgatgaagaagccaag
cggcgtctcgcagaagcgaacctccgtcttgtcgtgagcatcgccaagagatatgtagga
cgcggtatgcttttcctggacctgattcaagaaggtaatatgggtctgattaaagcagta
gagaaatttgattaccgtaaagggtataaattcagtacgtatgccacttggtggatccgt
caggcaatcacccgcgccattgcagaccaagccaggacgatccgtataccggttcatatg
gttgaaacgatcaataaattgatccgtgtccaaagacaattgcttcaggacctcggccgt
gaaccgtcaccagaggaaattgctgaagaaatggatctgactcctgaaaaagtcagggaa
attttaaagattgcacaagaacctgtttcacttgaaactccgattggtgaagaagatgac
tcacaccttggagatttcattgaagatgcagaagctcagtcaccttctgagcatgcagct
tacgaattgcttaaggaacaattggaagatgttcttgatacccttaccgaccgtgaagaa
aacgttcttcgtttacgtttcggccttgatgacggaagaacacgcacactcgaggaagtt
ggaaaggtattcggtgtcacacgggaacgtattcgtcaaatcgaagcgaaggcacttcgt
aaattgcgccatccaagccgcagtaaacgattgaaggacttcctggaatag
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