Bacillus haikouensis: KJK41_16800
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Entry
KJK41_16800 CDS
T08945
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bhai
Bacillus haikouensis
Pathway
bhai03030
DNA replication
bhai03430
Mismatch repair
bhai03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
KJK41_16800 (dnaE)
03430 Mismatch repair
KJK41_16800 (dnaE)
03440 Homologous recombination
KJK41_16800 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhai03032
]
KJK41_16800 (dnaE)
03400 DNA repair and recombination proteins [BR:
bhai03400
]
KJK41_16800 (dnaE)
Enzymes [BR:
bhai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
KJK41_16800 (dnaE)
DNA replication proteins [BR:
bhai03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
KJK41_16800 (dnaE)
DNA repair and recombination proteins [BR:
bhai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
KJK41_16800 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
QWC21950
LinkDB
All DBs
Position
complement(3361345..3364698)
Genome browser
AA seq
1117 aa
AA seq
DB search
MSFVHLQVASAYSLLSSTISINGLVHKAKTLGYRSLALTDRNMMYAAIPFYKACVKEGIK
PIIGLTADIAVSDEQSFPLVLLSRNNRGYQNLLKISSAIGAKSPEGIPHKWLSSYSDGLI
AITPGLQGEVETHLLNGEEDKAKEAIQLYKRMFGEGSFYISLQKHGLKAEETLHPLLKNI
ARENGVNMVAANDVRYLDKEDHFAHECMNAIRDGVKLSEDERTVLETEEYYFKTKEQMTE
LFPDEVEELQNTLRIAEECTVDIPFHQQLLPKYPLPEGVTARHELTRLCEIGLSEKLEEV
TAEYLERLDYELDVIGRMGFSDYFLIVWDFMKFARERDILTGPGRGSAAGSLVSYALSIT
DVDPIKHHLLFERFLNPERVSMPDIDIDFPDHRRDEVIEYVEAKYGSLHVAQIITFGTFA
AKAALRDTGRVFGLNMKEQEQLSKLIPNQPGITLKDAYEKSKELRDLIENQELYKRLFET
ALKLEGLPRHTSTHAAGVVISEDPLVQWIPIQGSASGIHLTQYSMDILEEIGLLKMDFLG
LRNLSILERIIKNIKKGRDKRFTLERIPSNDSKTFKLLSEGHTNGIFQLESDGMRNVLTR
LKPTSFEDIVAVNALFRPGPMENIPTYINRKHGKETVEYPHPDLKPILEMTYGVIVYQEQ
IMQIASKMAGFSLGEADLLRRAVSKKKKDVLDQEREHFVKGSIQKGYSTEEAHRIYDLIV
RFANYGFNRSHAVAYSMIAYQLAYLKAHYPAYFLSALLTSVVGNETKIAQYVREAKQYGI
DILPPSVNSSQFVFSVEGKEAIRYSLGAIKGIGAQVLKEIISVRKDKPFDDLFDFCMRVS
SKIINRKILENLVLAGAFDEFNIDRATLLASLDVAIQHAELVNPEDDHDLFKEEEAFLLK
PKYVEVEEMNAETKLNFEKQVLGLYLSDHPVTSYRLLLDDMGAALIVDVRQGAKASIGGF
ISSIRSIRTKKGEVMAFLEISDETGDMEAVVFPAVYRQIMTLLKEGNVLCFDGKIEERNN
KLQLIINRVQTIEEIKELSETREKKLFLRIPAADDQDASMKEIQRIIARYKGHQSVIVYI
EKDKKSIKLSDSYRIDASRDAISKLEAVLGKPNVVLT
NT seq
3354 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttgttcatttacaggtagcaagcgcttatagtttactttccagcacaatctcc
ataaatggacttgtacataaagcgaagacgctcggatatagatccctggcgttgaccgat
cgaaatatgatgtatgctgccattcctttttataaggcatgtgtgaaggaagggatcaag
ccgatcatcggtttgactgcggatatcgctgtcagcgatgaacagtcgttcccgcttgtg
ctgttgagcaggaataataggggttatcagaatctattgaagatatcgagcgcgatcggg
gccaagtccccggaagggatccctcataagtggctcagttcctacagtgatggcctgatt
gcgatcactcccggtctgcagggggaagttgaaacccatttattgaatggggaagaagat
aaagcaaaagaagccatacaactatacaaaaggatgttcggagaaggatctttttatatc
agtcttcaaaaacacggcttgaaggcagaagaaacgctccatcccctgctgaaaaatata
gcgcgtgaaaacggtgtgaatatggtggccgcaaacgatgtccggtatttggacaaggaa
gatcattttgcacatgaatgcatgaatgcaatacgcgatggtgtcaagctgtcggaagat
gaacggaccgtgcttgagacggaggaatactacttcaagacaaaagagcaaatgacagaa
ctttttccagatgaagtggaagagctccaaaacacgttgaggattgcagaagaatgcacc
gtcgatataccgttccatcagcagctcctcccaaaatacccgctccccgaaggtgtgaca
gcccggcacgagctcaccaggctttgtgaaatcggactgagtgaaaagcttgaagaggtt
acggccgagtatctggaaaggctcgattatgaactcgatgtcatcgggcggatgggcttc
agtgattatttcctcatcgtctgggactttatgaaatttgcaagggaaagggacatcctc
accggtcctggcagggggtctgcagcgggatcgctcgtttcttatgcactcagcatcacc
gatgtcgatccgatcaagcatcatttattattcgaacgtttccttaatcctgaacgggta
tcgatgcccgacatcgatattgattttccggaccaccgaagggatgaagtgatcgagtac
gtagaagcaaaatacggatccctccatgtcgcccagatcattacattcggtacatttgca
gcaaaggcagccctgagggatacaggcagggtattcgggttgaatatgaaagagcaggag
cagctttcgaagctgataccgaatcagcccggcataacgctgaaggatgcttatgagaaa
tccaaagagctccgtgatcttatcgaaaaccaggaattatataaacggttattcgaaacg
gcactgaagcttgaaggcctgccgaggcacacatctacacatgctgcaggcgttgtgatc
agcgaagaccctttggtgcagtggatcccgattcaagggagtgcatccggcatccatctg
acccagtattcaatggatatccttgaagaaatcggcttattaaaaatggatttcctcggt
ctcaggaatcttagcatcctcgagaggatcataaagaatataaagaagggaagggataaa
cgctttactttggaacgcatcccttcaaatgacagtaaaaccttcaaactcctcagtgaa
gggcacaccaacggaatctttcagcttgagtcggacggcatgcgcaatgttttgacaagg
ctgaagcccacttccttcgaggatatcgtcgcggtcaacgccctgttcaggccgggcccg
atggaaaacatcccgacgtatatcaatcggaagcatggtaaggaaacggtggaatatccc
catccggacttgaagccgatccttgaaatgacatacggcgtcatcgtttatcaggagcag
atcatgcaaatcgcttcaaaaatggccggcttttcactaggcgaagccgacctgttaaga
agagccgtctcgaaaaagaaaaaagacgttctcgatcaggaaagggagcatttcgtgaaa
ggttccattcaaaaaggctattcaacagaagaggcacatcgcatttatgaccttatcgtc
cgatttgcaaattatggattcaaccgttcccatgcggttgcctatagtatgattgcctat
cagctggcatacttgaaagcccattatcctgcttactttttatctgccctccttacctcc
gtcgtcggcaatgaaacgaaaatcgctcagtatgtaagagaagcgaaacaatacggcatc
gatattctgccaccgtccgtcaacagcagccaatttgttttctctgtggaggggaaagag
gcgatcaggtacagtctcggcgcaatcaaagggatcggggcacaggtactgaaagaaatc
atctctgtaagaaaagacaagccatttgatgatttgttcgatttctgcatgagggtttcc
tcgaaaatcatcaacaggaagatattggagaaccttgtgttggcaggtgcctttgatgaa
ttcaatatagaccgggccaccctcctcgcaagccttgatgttgcgattcagcatgcagag
ctcgtcaacccggaggatgatcatgatctatttaaagaagaagaagcattcctgcttaaa
ccgaaatatgttgaagtagaggaaatgaacgcagaaacgaaattgaatttcgaaaaacaa
gtcctgggactttatctttcagatcatcctgtgacttcgtatcgtctgcttctggatgat
atgggagccgcattgattgtagatgtccggcagggtgcgaaagcgtcaataggcggcttt
atcagctcgatcaggtcaatccgcacgaaaaagggcgaggtcatggcgttccttgaaatc
agtgatgaaacaggagatatggaagcagtcgtatttcctgcggtctaccgccaaattatg
acactcctgaaagaagggaatgtgctatgttttgatggaaaaatagaggaacgcaacaat
aagctgcagcttatcatcaacagagtgcaaaccatcgaagagataaaggaactttctgaa
acacgggagaagaaactattcttgagaattcctgctgccgatgatcaagatgccagcatg
aaggaaatacagcgcatcatcgctcgttacaaggggcatcaatcggtgattgtctatatt
gaaaaagacaagaaaagtataaaactatctgattcttatagaatagatgcgtcccgggat
gcgattagtaaattagaagcagttttaggaaaacctaatgtcgttttgacataa
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