Bacillus haikouensis: KJK41_20915
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Entry
KJK41_20915 CDS
T08945
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
bhai
Bacillus haikouensis
Pathway
bhai03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhai00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KJK41_20915 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhai03021
]
KJK41_20915 (rho)
03019 Messenger RNA biogenesis [BR:
bhai03019
]
KJK41_20915 (rho)
Transcription machinery [BR:
bhai03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
KJK41_20915 (rho)
Messenger RNA biogenesis [BR:
bhai03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
KJK41_20915 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
ATPase_2
AAA_22
AAA
NACHT
AAA_25
Mor
Motif
Other DBs
NCBI-ProteinID:
QWC22678
LinkDB
All DBs
Position
complement(4240960..4242222)
Genome browser
AA seq
420 aa
AA seq
DB search
MEELTISSLENMKLKELYELAKRYKVSYYSKLTKKELIFAILKVRAEQEGFFFMEGVLEI
IQSEGFGFLRPINYSPSSEDIYISASQIRRFDLRNGDKVSGKVRPPKENERYFGLLHVEM
VNGEEPEAAKERVHFPALTPLYPDRQITLETTPNRISTRIMDLMAPVGFGQRGLIVAPPK
AGKTMLLKEIANSITTNNPEAELIILLIDERPEEVTDIERSVDAEVVSSTFDEVPENHIK
VAELVLERAMRLVEHKRDVVILMDSITRLARAYNLVIPPSGRTLSGGIDPAAFHRPKRFF
GAARNIEEGGSLTVLATALVDTGSRMDDVIYEEFKGTGNMELHLDRSLAERRIFPAIDIR
RSGTRKEELLIPQEHLDKLWAIRKAMSDQPDFAEKLMRKLKQSKTNHEFFEVLTEEAKKR
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggaagagttaacaatctccagcttagagaacatgaagctgaaagagctttatgagctg
gctaaacgatacaaagtttcttattatagtaaattaacaaaaaaagaattaatcttcgcg
atcctgaaagtaagggcggaacaggaaggcttcttcttcatggaaggtgtccttgaaatc
atccaatctgaaggattcggattcctgcgcccaatcaattattccccaagctctgaggat
atctatatctctgcgtcgcagatccgccgcttcgaccttcgtaacggggacaaagtatcc
ggtaaggtacgccctccgaaagaaaacgaacgttacttcggacttctgcatgtggaaatg
gtcaacggcgaagagcctgaagcagcgaaggaacgcgttcacttccctgccctgacgcct
ttatatcctgaccgtcaaatcacattggaaacaacaccgaacaggatttcaacacggatc
atggatctcatggcacccgtcggtttcggccagcgcggtctgatcgtggcaccgcctaaa
gccggtaagacgatgcttttaaaagagattgcgaattcgatcacgacgaataatcctgaa
gcggaattgatcatcctcctgattgatgaacgtcctgaagaagtgaccgacatcgaacgt
tcagtggatgcggaagtcgtttcttctacatttgacgaagttcctgaaaaccacatcaaa
gtggccgagctcgtccttgaacgtgcaatgcgtcttgtggagcacaagcgtgacgtcgtc
atcctgatggacagcatcacccgtctggcgcgtgcatacaatcttgtcatcccgccaagc
ggacgtacattgtccgggggtattgacccggctgcgttccaccgtccgaagcgattcttc
ggtgcggctcgtaatatcgaagaaggcggaagcttgacggtacttgctacggcactggtt
gacaccggttcacgtatggatgacgtcatttatgaagaattcaaggggacgggtaacatg
gaacttcaccttgaccgttcacttgccgaacgccgtatcttccctgcgatcgacatccgc
cgctccggtacgcgtaaagaagagcttcttatcccgcaggagcacttggacaaactgtgg
gcgatcagaaaggcgatgtccgatcagcctgatttcgcagaaaagcttatgcgcaagctg
aagcagtcgaagacgaatcacgagtttttcgaagtgttgacagaagaagccaagaagcgt
taa
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