Bacillus haimaensis: ABN702_03780
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Entry
ABN702_03780 CDS
T10988
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
bham Bacillus haimaensis
Pathway
bham03410
Base excision repair
bham03430
Mismatch repair
bham03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ABN702_03780 (recJ)
03430 Mismatch repair
ABN702_03780 (recJ)
03440 Homologous recombination
ABN702_03780 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bham03400
]
ABN702_03780 (recJ)
DNA repair and recombination proteins [BR:
bham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
ABN702_03780 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
ABN702_03780 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
ABN702_03780 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ssDNA-exonuc_C
RecJ_OB
DHH
DHHA1
Motif
Other DBs
NCBI-ProteinID:
XPD21307
LinkDB
All DBs
Position
794592..796937
Genome browser
AA seq
781 aa
AA seq
DB search
MLASKSRWNVNKPDQEQVRNLAESLKVAPLIASLLVNRGLDDYETAKSFLNTETQEFHDP
FLLEDMEKVVQRIETAIQNEEKILVFGDYDADGVSSTTVMVTALREKGAKVDFYIPNRFT
EGYGPNETAFRQAKESGYSIIITVDTGISALHEADVARDLGVDLIITDHHEPGPVLPDAF
AIIHPKKETCPYPFKDLAGVGVSYKVAHALLGKNPEHLLEVAAIGTIADLVPLVDENRLL
ASKGIKKMQQTKRVGLKALLQKCGVELHTITEETIGFSIGPRINAVGRLDNADPAVHLLM
TEDAEEAKALAEEMEAYNKERQQIVTQITEEAIKQVEEMYPPDENSFLIVAGHNWNAGVI
GIVASRLVDRFYRPTIVLSLDGEKGLAKGSARSIPGFDLFENLSTCRDILPHFGGHPMAA
GMTLKLENVDELRDRMKQIADTILTEEDFTPITEVDIECELNEITLETIEQLEKLAPFGI
ANPKPKVLVKGALPQQIRQIGNKSNHLKLVIEKEGSSLDCVGFGFGETYHHVSPIASLDV
LGELAINEWNNFRKPQLFVKDLRIAEWQLFDIRSAKQLNQTLQGIDKKNLQILFFNTATL
EEVKIGEEHLPYLTNVEPGTEIDVEDKYIVLLDIPNEEETLASLLRNSSPSRIYASFHQK
ENHYFSTIPTRDHFKWYYGFLSKKGPFDLNRYAEEIAKHRGWSKETIDFMSQVFFELEFV
TIDKGFIALNNAAKKRDFEESQTYRKKQQQVMLENLFLYSSYKQLKAWFDQHLTKQCTVH
S
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
ttgctagcttctaaatcacgttggaatgtaaataagcctgaccaagagcaggtacggaat
ttggcggaaagcctgaaagtggctcctcttattgcttctctccttgtaaaccggggactg
gatgattatgagaccgcgaaaagttttttgaatacagagacccaagaatttcacgaccca
ttcctgttggaagacatggaaaaggtcgttcagagaatagaaacggcaatacagaatgaa
gaaaagattttggtattcggcgattatgatgccgatggagtaagcagtaccactgtgatg
gttacagctctcagagaaaagggagcgaaggtggatttctatatccccaaccgttttaca
gaaggttatggaccaaatgaaactgcattcaggcaagccaaggaaagcggctattccatc
atcatcacagttgataccggaatttccgctctgcatgaagcggatgtggcaagggatctg
ggcgtcgacctgatcattaccgaccaccacgagcctgggccagttctaccggatgcattt
gccatcatccatcctaagaaagaaacgtgcccttatccattcaaagaccttgcaggagtg
ggcgtctcttataaagtggctcatgcgctattagggaagaacccggagcacctactggaa
gtggcggctattggaacgattgctgaccttgtacctctggtggatgaaaatagactttta
gcatccaaagggatcaaaaagatgcagcagacaaaaagagtcggattaaaggccttgctg
caaaaatgtggagtagaactccataccattacagaagaaacgatcgggttctccatcgga
ccaaggatcaatgcggtgggacgcctcgacaatgcagatccagccgtacatcttctaatg
acagaagatgcggaagaagcaaaagcgctagccgaggaaatggaagcctacaataaagaa
agacagcagattgttacgcaaattaccgaagaagcgatcaaacaagtcgaggaaatgtac
cctcctgatgagaattcgtttctgatcgtagcaggacataactggaatgcgggagtcatc
ggtatagtggcctcaaggctggtggaccgtttctatcgaccgaccatcgtgctgagcctt
gatggggaaaagggccttgcaaaaggatctgcccgttccataccggggtttgacctgttc
gaaaacctatccacttgcagggatattctcccgcactttggcggccatccgatggcagct
ggtatgacattgaaattggaaaatgtggacgagcttcgcgaccgaatgaagcaaattgct
gataccattttgacggaggaagatttcaccccgatcactgaagtggatatcgaatgtgaa
ctgaacgaaataacattggaaacaatcgagcagttagagaagcttgcaccattcggcatt
gcaaatccaaagcctaaagtattggtgaaaggtgcattgccgcagcagattcgtcagatt
ggcaataagagcaaccacctgaagcttgtcatcgagaaggaaggaagctcgctcgattgt
gtcgggttcggatttggggaaacctatcaccatgtgtcaccaattgcgtcacttgatgtt
ttgggggagcttgccatcaatgagtggaataatttccgaaagcctcagctttttgtaaaa
gaccttagaattgcagagtggcaactgtttgatattcgttcagcaaagcagctgaatcaa
acattgcaaggaatagataagaagaatctacaaatactgttctttaatactgcaacattg
gaagaagtgaaaataggtgaggaacatctgccttatctaacgaatgttgaaccaggaaca
gaaatcgatgttgaggataaatatatcgtgctgctggatattccgaacgaagaggaaaca
cttgcaagccttttgcgaaactcttccccatcccgcatctacgcttcttttcatcaaaaa
gaaaatcattatttttccaccatcccgactcgcgaccactttaagtggtattacggcttc
ctgtccaaaaaaggtccgtttgatttgaacaggtatgccgaagaaatcgcgaaacatcgg
ggttggtcaaaagaaacaatagatttcatgtcacaggtgttttttgaactagaatttgtt
acaatagacaagggctttatcgcattgaacaatgcggcgaaaaaacgggattttgaagag
tctcagacatatcgcaaaaagcagcagcaagtgatgcttgaaaacttgtttttatactct
tcatataaacaattaaaagcgtggtttgatcagcatctaaccaaacagtgcactgttcat
tcatag
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