Bacillus haimaensis: ABN702_03875
Help
Entry
ABN702_03875 CDS
T10988
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
bham Bacillus haimaensis
Pathway
bham03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ABN702_03875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bham03400
]
ABN702_03875
Enzymes [BR:
bham01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ABN702_03875
DNA repair and recombination proteins [BR:
bham03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ABN702_03875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
AAA_22
T2SSE
HHH_5
AAA_12
nSTAND3
AAA_16
AAA
NTPase_1
AAA_28
NPHP3_N
TsaE
DUF4926
AAA_18
Rad17
AAA_17
AAA_29
Hen1_Lam_C
Motif
Other DBs
NCBI-ProteinID:
XPD21324
LinkDB
All DBs
Position
816336..818741
Genome browser
AA seq
801 aa
AA seq
DB search
MKDQKQQSSLDLFEEHEKFIKGSHLVTIFHNESNMYSVVRIRVTETNVPYEEKEAVVTGY
FPRIHEDETYIFFGTMKEHPRFGLQFHVEHFRKDIPQTRQGIVQYLSSDLFSGIGKKTAE
KIADALGENAISKILENPSVLDSIPKLPGDKAKLLYDSLMEHQGLEQVMIALSQFGFGPQ
LSMKIYQTYKDETISILQKNPYQLVEDVEGIGFARADELGSHFSISGNHPDRIRAGCLYM
LEQYSMSEGHCFVSENQLVEAVWKLLNEKQQGLVVDSDISREILQLTEEGKLKSEEGRVY
LPSLYFSEQGLVSNIKRVMEQTQYAEQFPESEFLLALGELEDRLKVQYAPSQKEAIQQAL
MTPMLLLTGGPGTGKTTVIKGIVELYADLHGCSLEPDDYSKDDPFPIMLVAPTGRAAKRM
SEATGLPSLTIHRLLGWNGSEGFQHDEENPIPGKLLIVDEVSMVDIWLANQLFKSLPADI
QVVLVGDEDQLPSVGPGQVLKDLLSSQAIPTVKLTDIYRQADGSSIIELAHSMKDGVVPA
DIAVAKKDRSFIKCGQAQIMDVVKKVCANAQSKGYTARDIQVLAPMYRGNAGIDKLNEML
QELFNPKSEGRRELAFGNVVYRSGDKVLQLVNQPESNVFNGDIGEVVSIFYAKENTEKQD
MVIVSFEGNEVTYTKQDLGQITHAYCCSIHKSQGSEFPIVVLPVVKSYYRMLRRNLLYTA
VTRSKRFLILCGEEDALRIGVQRADEQARQTSLKERLNNQASIVLQNDEADEAILAEIPF
WKDANIGMENISPYDFMGEDE
NT seq
2406 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccagaagcagcaatcctctctcgacttgttcgaggaacatgaaaaatttata
aaaggctctcatctagtcaccattttccacaacgaatccaatatgtattccgttgtccgg
atcagagtgacggagacaaatgttccatatgaggaaaaggaagcggtcgtaactgggtat
ttccctcgtatccatgaggatgaaacatacatatttttcgggacgatgaaagagcatccc
cgttttggacttcagtttcatgttgaacacttccgcaaagatatcccgcaaacacgtcaa
ggtattgtacagtatctatccagtgacttattttcgggaatcggaaaaaagactgcagag
aaaatagcggatgcactaggtgagaatgccatctccaagattttagagaatccctctgtc
cttgattcgatcccaaaactgcctggtgacaaagcgaagctgctctatgactccctaatg
gagcatcaggggcttgaacaagtcatgattgccctttcacaatttgggtttggcccgcag
ctctccatgaagatctatcagacctataaggatgaaacaatcagtatccttcaaaagaac
ccctatcagcttgtcgaggatgtggaaggtatcggatttgcaagggcagatgagctcggc
agtcacttcagtatttccggtaaccatccggatcgtatcagggcaggatgcttgtacatg
ctagagcagtattccatgtcggaggggcattgttttgtttcggaaaatcagctggtagaa
gctgtgtggaagcttttaaacgagaagcagcaaggattggttgtagattctgacatttct
cgggaaattctgcagctgacggaagagggcaaactgaagtcggaagagggacgtgtctat
cttccgagtctctacttttcagagcaggggcttgtctctaatatcaaaagagtgatggag
caaacccagtatgcggagcagttcccggagtccgaatttttattggctctgggtgaattg
gaggaccgattgaaggtgcaatatgccccttcccagaaagaggcaatccagcaggcattg
atgactccgatgctccttttgacaggaggacccggaactggaaaaacaactgtcatcaag
gggattgtggagctgtatgcagaccttcatggatgttcgctggaaccggacgattattcc
aaggacgatccgtttccaattatgcttgtggcaccaacaggccgtgctgcgaaaaggatg
agtgaagcgaccggcctgccttctcttaccatacacaggttgcttggatggaacggctcc
gaaggctttcagcatgatgaagaaaatccaattcccggtaagctgctgattgtcgatgag
gtgtcgatggtggacatatggcttgcaaaccagttgttcaaatcactgccggcagatatt
caagttgtcttggtaggggatgaagaccagcttccttcggttggtccaggacaagtatta
aaagacctattgtcctcccaagccattccaactgtgaagttgacggatatctacaggcaa
gcggatggaagctccatcatcgagctggcgcatagcatgaaggatggtgtggtgccggca
gatatagcggtggccaagaaagaccggtcctttatcaaatgtgggcaagcccagataatg
gacgtggtcaaaaaggtctgtgccaatgcccagagcaaagggtacaccgcgcgcgatatc
caggtgctggcgccaatgtatcgcggaaatgccggtattgacaagctgaatgaaatgctg
caggagctattcaaccctaaaagtgaagggcgtcgtgaactggccttcggaaatgtcgtc
tatcgatcaggagacaaagtgctgcagctcgtcaatcagccggagagtaatgtattcaac
ggggatataggtgaagttgtttccatcttctatgccaaagagaacacggaaaagcaagac
atggtgatcgtatcatttgaaggtaatgaagtaacctatacaaaacaggacctcggccag
attacgcatgcatactgctgttccatacataagtcccaaggaagtgagtttccaattgtg
gtgcttcctgttgtgaaaagctattaccgaatgctgcgcagaaatttgctttacactgca
gtaacacgttctaaacgcttcctgatactatgcggggaagaagatgcattaaggatcggg
gtacaacgggccgatgagcaggcgaggcagacttcattgaaggaaaggctgaataatcaa
gcctcgattgtcttacagaacgacgaagcggacgaggccattcttgcggaaatccctttc
tggaaggatgccaatatcggaatggaaaacatatcgccatatgactttatgggcgaggat
gaatag
DBGET
integrated database retrieval system
