Bacillus haimaensis: ABN702_08685
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Entry
ABN702_08685 CDS
T10988
Symbol
helD
Name
(GenBank) RNA polymerase recycling motor HelD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bham Bacillus haimaensis
Pathway
bham03420
Nucleotide excision repair
bham03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABN702_08685 (helD)
03430 Mismatch repair
ABN702_08685 (helD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bham03400
]
ABN702_08685 (helD)
Enzymes [BR:
bham01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABN702_08685 (helD)
DNA repair and recombination proteins [BR:
bham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABN702_08685 (helD)
MMR (mismatch excision repair)
Other MMR factors
ABN702_08685 (helD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
AAA_22
UvrD_C
Viral_helicase1
UvrD_C_2
PhoH
SLFN-g3_helicase
AAA_16
AAA_30
DEAD
NACHT
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
XPD22208
LinkDB
All DBs
Position
1709805..1712141
Genome browser
AA seq
778 aa
AA seq
DB search
MNSEHLQEQKRVDRVMETITEEINRLEDETEKRRNEVVHIRKHFWDEVKVNTDTFDDFLE
TIIGLRQEAQALSVSQSTHKHASKRLSTLRRMQAAPYFGRIDFVEEGNSTQEQIYIGISS
LIDNSGENFLIYDWRAPVSSVYYDYQPGPAKYLTPGGEIHGIFEKKWQYLIRGGVLESMF
DTSLTIGDEILQQVLGKGTDKKMHNIVATIQQEQNRIIRHDHGRLLVVHGAAGSGKTSAA
LQRIAYLLYKYRDHLNADQIILFSPNSMFSSYVSNVLPELGEENMQQVTFQEYLDHRLSK
EFQLENPYEQLEYILTASHTPSYRSRLAGIRFKASTRFFEALTSYRQSLELSGMLFNDIT
FRGQPIITGKQIAERFYSHDSSLRFHNRLEKLKEWLTKKISEVQKVERSKPWVQDEIELL
SNDDYHKAHKFLAKKRGFERESIGDYEMEPEELARLIVHQKLKPIRKRVRAFSFIDFKGL
YNQLFTDQLQIEHWMEGETPAEWADICEATLETLNEDQLFYEDATPFLLLKELIQGFQTN
SSIKHIVVDEAQDYSPFQFEFLKRLFPAARMTVLGDFNQAIFAHASEEANFNTLTSLYGP
DKTEIINIARSYRSTKPIIEFTRRLVPNGEGIIPFERDGERPALKQLVDQEELHSCIASK
VADLRSLGLDSIAIICKSAKESLHAYQSLSSIDGIKLLKSNSIQYEQGVVVVPSYLSKGI
EFDAVIIYDASSHVYGDESLRRVFYTACTRAMHQLQLYSVGEPSPFLRRVLREGFIQS
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaattcagaacatctacaggagcaaaaacgagtagaccgtgtaatggagactattacg
gaggaaatcaacagattagaagacgaaactgagaagcgtcggaacgaagtggttcatatc
cgcaaacacttttgggatgaagtaaaggtaaatacggacacctttgatgattttctggag
accattatcggcttgcgccaagaggctcaagctctgtcggtgagccaaagcacccataaa
catgcatccaagcgattatccacgcttcgcagaatgcaggcggctccctattttggtcgg
atcgattttgtcgaagaagggaattcaactcaggaacaaatctatattggtatctcctcg
cttattgataatagtggagagaatttcttgatctatgactggagggcacctgtttcgagt
gtctactacgactaccagcccggtcctgctaagtacttaaccccgggaggcgaaatccac
ggcatatttgagaaaaagtggcaatatcttatccgcggcggtgtcctagagtccatgttc
gatacgagtctcaccattggagacgagattttacagcaggttctcggaaaaggtaccgac
aaaaagatgcacaatatagtagccaccattcaacaggagcagaaccggatcatccgtcat
gaccacgggaggctgctcgttgttcatggtgcagcaggcagtggcaagacatcggccgcc
cttcaacgaattgcttatttgctatacaaatatcgagatcatttgaatgctgatcaaatc
atacttttctcgcctaattccatgttcagcagttatgtgtccaatgtacttccagagctt
ggtgaagagaatatgcaacaggtcacattccaggaatacttggatcatcgtctgagtaaa
gagttccaactcgaaaatccctacgaacagttggaatatattttaactgcgtcccatact
ccttcctataggtcaagacttgcgggtatccgttttaaagcatctacgcgtttttttgag
gcactcacatcatatagacagtcactggaattatcagggatgttatttaatgatattacc
ttcagagggcaaccaatcattactggcaaacaaatagctgaaaggttctatagccatgac
tcttccctacgtttccataatagactggaaaaattgaaggaatggttaaccaagaaaata
agtgaggtccaaaaggtcgagcggtcaaagccttgggtacaggatgaaattgagctgctt
agcaacgatgattaccataaggcacataagttcttagcgaaaaaacggggctttgaaaga
gaatcaattggtgactatgaaatggagccagaagaacttgcccggttgattgttcaccaa
aaattgaagcccatacgaaaacgagtccgagcttttagttttatcgactttaaagggcta
tacaatcaactttttactgatcaactgcagatcgagcattggatggaaggggagacacca
gcagaatgggctgatatttgtgaggcaaccttggaaacgctgaatgaagatcaacttttt
tatgaggatgctactccgtttctccttttaaaagagctgattcaaggctttcagacaaac
agctcgatcaaacatatagttgttgatgaagctcaagattattccccatttcaatttgaa
tttctgaagcgattgtttcctgcggcaaggatgaccgtgcttggcgactttaaccaggca
atatttgcccatgccagtgaagaggctaatttcaacacacttaccagcctttatggaccc
gataaaacggagattatcaacatcgctcgaagttaccgttccaccaaaccaatcattgaa
ttcacccgaagacttgttccaaatggagaagggattattccttttgaacgcgacggtgag
cgacctgccctgaaacaattagtcgatcaagaagaactgcacagttgcatcgcctccaaa
gtcgcagatttgcgaagtctagggcttgatagtattgcgatcatatgtaaatctgctaag
gaaagtttacatgcatatcaatctctttccagtatcgatggaattaaactcttaaagagc
aattcgattcagtatgaacaaggtgtagttgtcgtaccgtcgtatttatccaagggcatc
gaattcgatgctgttattatttatgatgcatcatcgcatgtatatggtgatgagagcctg
cgcagagttttttacaccgcctgcactagagcgatgcatcaattacagctttacagtgta
ggggaaccgagcccatttttacgaagagtattgagggagggtttcatccaatcttaa
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integrated database retrieval system
