KEGG   Bacillus haimaensis: ABN702_09745
Entry
ABN702_09745      CDS       T10988                                 
Symbol
hfq
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
bham  Bacillus haimaensis
Pathway
bham02024  Quorum sensing
bham03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bham00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    ABN702_09745 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ABN702_09745 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bham03019]
    ABN702_09745 (hfq)
   03036 Chromosome and associated proteins [BR:bham03036]
    ABN702_09745 (hfq)
Messenger RNA biogenesis [BR:bham03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     ABN702_09745 (hfq)
Chromosome and associated proteins [BR:bham03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    ABN702_09745 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 LSM DUF5608
Other DBs
NCBI-ProteinID: XPD22407
LinkDB
Position
complement(1913428..1913655)
AA seq 75 aa
MKQSINIQDQVLNQLRKDSTGVTVFLLNGFQLRGLIKGFDNFTVLLETEGKQQLIYKHAI
STFSPSKNVQIETEA
NT seq 228 nt   +upstreamnt  +downstreamnt
atgaagcaatcgattaatatccaagatcaggttctgaaccaactaagaaaagatagcaca
ggtgtaacggtatttttattaaatgggttccaacttcgaggattaattaaagggtttgat
aatttcactgtgctgttagagactgaaggcaagcagcagttaatttataaacacgccatt
tccactttttctccgtccaaaaatgtccaaatcgaaacggaagcttaa

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