Bacillus haimaensis: ABN702_09950
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Entry
ABN702_09950 CDS
T10988
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
bham Bacillus haimaensis
Brite
KEGG Orthology (KO) [BR:
bham00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bham03016
]
ABN702_09950 (truB)
Enzymes [BR:
bham01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ABN702_09950 (truB)
Transfer RNA biogenesis [BR:
bham03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ABN702_09950 (truB)
Prokaryotic type
ABN702_09950 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
XPD22444
LinkDB
All DBs
Position
complement(1960303..1961223)
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AA seq
306 aa
AA seq
DB search
MDGILVLNKPKGFTSHDCVFKVRKILKTKKVGHTGTLDPEVTGVLPICIGKATKLVEFLT
AEQKTYIGEVTIGFSTTTEDQTGEVVEKKEVTESISQEKIEQVLKELTGEIDQTPPMFSA
VKINGKKLYEYAREGKVIDRPSRKITIYDLFLTSEIKHENDTLKFSFEVSCSKGTYVRTL
AVQIGELLGYPAHMSLLTRVASGNFKIDQAITLEELEVLMVNDKVDSVLVPMENALNSLP
KLEISDTVAEKVQNGAVLTFPEEFDGEAEYFSVFHNNACLAIYMKHPTKPGLMKPKKVFH
GQDSGL
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
ttggatggcattctggtcttaaacaaaccaaagggatttacttctcatgattgtgtcttc
aaagtgaggaaaatcctaaaaacgaaaaaagtcggtcacacaggcacactcgatccggaa
gttacaggtgttctgccgatctgcattggaaaggcgactaaacttgttgagttcctgaca
gctgaacaaaaaacatacataggggaagtaacaataggcttttccaccacaaccgaggat
caaactggtgaagtggtggagaaaaaagaagtaactgaatctatttcgcaagagaaaata
gagcaggttctaaaagaactgacaggtgaaatagatcagacccctcccatgttctccgcg
gtgaaaataaatgggaaaaaattatatgaatatgctagagaaggaaaagtaatagaccga
ccttccagaaaaattaccatctacgacctttttctaacaagtgaaatcaagcatgagaac
gatactttgaagttttcatttgaagtttcatgcagcaaagggacctatgtaaggacattg
gcagtccaaataggggaactgcttggctatccagcacatatgagtctattgaccagagtc
gcttctgggaattttaaaattgaccaggcgattacattggaggaactcgaagttttgatg
gtgaacgataaagtggacagtgtccttgttccaatggaaaatgcgttaaactcgttgcct
aagcttgagataagtgatacagtagcagagaaagtccaaaatggagcagtcctcaccttt
cctgaagagtttgatggtgaagcggagtacttcagtgttttccataataatgcctgccta
gccatttacatgaagcatccgacaaaaccgggattaatgaagccgaagaaggtttttcac
ggtcaggacagtgggctttaa
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