Bacillus haimaensis: ABN702_12980
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Entry
ABN702_12980 CDS
T10988
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
bham Bacillus haimaensis
Pathway
bham03420
Nucleotide excision repair
bham03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
bham00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ABN702_12980
03430 Mismatch repair
ABN702_12980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bham03400
]
ABN702_12980
Enzymes [BR:
bham01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ABN702_12980
DNA repair and recombination proteins [BR:
bham03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ABN702_12980
MMR (mismatch excision repair)
Other MMR factors
ABN702_12980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_12
CoiA
DEAD
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
XPD18888
LinkDB
All DBs
Position
2548826..2551126
Genome browser
AA seq
766 aa
AA seq
DB search
MKSAIWNKRSIHLDKMTRERYQEIYEAGVKGELQCTVCGESVKLYLGLHKEPHFHHIHTS
IVHEMPIEELETVPPTNTREEVYVERNGFRLPMSRSIATDSGIDTVKQVKWKNPKLLSKL
PIFIKENSTPLSTLGGFFHQIEKKNIFLDSAQQEAASSIDGPLLVLAGAGSGKTRVLTTR
VAYMVHEKGIDPRSIMLITFTAKAANEMKERLQMYEDQHARVFSSLVAGTFHSIFYKMLA
HHHPARWNGDNLIKWDWQKEQFLKSAGRKIGLDEKDFPFDQAIQQIGFWKNNMLTPKMIT
PSNKVEEQIASLYNDYEDWKKEKQLFDFDDMLIGCYELLLENPALLTRYQERFRYFLIDE
FQDINKVQYETIKLLAPEGNICAVGDDDQSIYAFRGSNPDFILNYHLDFPNTKVVTLSQN
YRSAHSIVSAANLVIQKNKSRKQKRMVAQYDNQTWPVLFFPYDEEEEATLIVQDMKEQIE
KGKQPRDFAVLYRTHSAARAIFERLSQSGLPFTLDQDYESFYKRRIVKAILGFLRLSRDP
NDVHAFSDILPSLFLRQSSLQDAKALSILEDCSLVKTMSKLSNLQPFQLKKIKRIVPLFS
TLKTVTPLVALEMIEKDMGFDDYIKKRGNEGNALEKGSDDIRDLKVVAKKFNSISAFLEH
ADDMIAKTDEMKKLSKKYGNAIHLSTIHRSKGLEYNHVYILSAVDGSLPHDFSLEAFRNG
EHLALEEERRLLYVAMTRAQDALYLSIPENRRGKKAYMSRFIKDIL
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgaagtctgccatttggaacaaacgatccatacatttagataaaatgacgagagaacgc
tatcaggaaatatatgaagcaggtgttaaaggcgagctccaatgtacggtttgtggagaa
agcgttaaactctatctcggtcttcacaaagaacctcatttccaccatatacatacatcc
attgtccatgaaatgccaatagaagaactggagacagtaccgcccaccaatacccgagaa
gaagtctatgtggagcgtaatggattccgtttaccgatgtccagatcaatagcgaccgac
tcaggcatagatactgtcaaacaagtaaaatggaaaaatcctaagctactttccaagcta
cctatctttattaaagaaaattcgactcccctttctactttaggtgggtttttccaccaa
attgagaagaaaaatattttccttgattctgcacaacaggaagcggcttcctccattgat
ggaccgcttcttgttcttgcaggggcaggtagcggtaaaactcgcgtccttacaacccga
gtggcctatatggtgcatgaaaaagggatagatccccgctccattatgctgattacattt
acagcaaaagccgcgaacgaaatgaaagaaagattgcagatgtatgaagatcagcatgca
agggttttttccagccttgttgcaggtacctttcatagtatcttctataaaatgctggcc
catcatcaccccgctcgctggaatggggataacctcatcaagtgggactggcaaaaggaa
cagtttctgaaatcagcggggaggaaaatcggactcgatgaaaaggattttccctttgat
caggctattcagcagattggattttggaaaaacaatatgctgacaccgaaaatgattaca
ccaagcaataaggttgaagaacaaatagctagcttgtacaacgattatgaggattggaaa
aaagagaagcagttgtttgactttgatgatatgcttatcggctgctatgagctattattg
gagaatccggcacttttgaccagatatcaggaacgcttccgctattttttgattgatgaa
ttccaggacatcaacaaagtacaatatgaaaccatcaagcttctcgcccctgaaggaaac
atctgtgcagttggggatgatgatcaaagcatttatgcttttagaggtagtaatccagac
ttcatcctgaattatcaccttgatttcccgaacaccaaagtggtcactctatctcaaaat
taccgctccgcccacagcatcgtttcagcggccaacctggttatccaaaagaataaaagc
cgcaagcaaaaaagaatggttgctcaatatgacaatcagacctggcctgtgctgttcttt
ccttatgatgaagaagaagaagcaaccttgattgtacaggatatgaaggagcaaatcgaa
aagggaaaacagccacgtgattttgcggtattgtatcgaacacatagtgcagcgagagcg
attttcgagcgcctttcccagtcaggccttccatttacattggatcaggattatgaaagc
ttctataagcggcgaattgtcaaagctatcctcggttttctccgtctaagccgggatccg
aacgatgtacatgcattttctgatatactgccttccctattcttaaggcaatcaagcctt
caggatgcaaaagcattaagcattcttgaggattgcagtctggtaaaaacaatgagtaaa
ttatctaatctccagccatttcaactaaagaaaatcaaaaggatcgtaccactgttttcc
actttgaaaacggtgactcctcttgtggcacttgaaatgattgaaaaggacatgggcttt
gatgactatatcaagaaacgtgggaacgaaggcaatgccctagagaaaggctcggatgat
attcgtgatctaaaggttgtggcaaagaaattcaattccatttccgctttcctggagcat
gccgatgatatgatcgccaaaacggatgagatgaaaaagctgagtaaaaagtacggcaat
gctattcatctttcgaccatccatcgttcaaaaggtttggagtataatcatgtatatatt
ctaagtgcagtagacgggagcctcccacatgatttttccttggaggcatttcgcaatgga
gaacacctggcgcttgaagaagagcgcagattgctttatgttgcaatgactcgtgcacag
gatgcattgtatctttccattcctgaaaacagaagaggaaagaaagcttatatgtcacga
ttcattaaagatattctataa
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integrated database retrieval system
