Bacillus haimaensis: ABN702_18845
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Entry
ABN702_18845 CDS
T10988
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bham Bacillus haimaensis
Pathway
bham03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bham00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ABN702_18845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bham03019
]
ABN702_18845
03009 Ribosome biogenesis [BR:
bham03009
]
ABN702_18845
Enzymes [BR:
bham01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ABN702_18845
Messenger RNA biogenesis [BR:
bham03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ABN702_18845
Ribosome biogenesis [BR:
bham03009
]
Prokaryotic type
rRNA helicases
ABN702_18845
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
GRP
CMS1
AAA_22
NABP
Helicase_RecD
AAA_19
Motif
Other DBs
NCBI-ProteinID:
XPD19925
LinkDB
All DBs
Position
complement(3713738..3715261)
Genome browser
AA seq
507 aa
AA seq
DB search
MAFFKDLGLSDDIMQSINRMGFEEATPIQSETIPVALEGKDVIGQAQTGTGKTIAFGLPL
LENVDVKNESIQGIVIAPTRELAIQVAEEIYKAAYHKRVRVLSVFGGQDISRQIRSLKKN
PHIVVGTPGRLLDHINRKTLRLQNVNTVVLDEADEMLNMGFIEDIEKILAETPEQKQTLL
FSATMPAPIRAIAERFMSEPVSVKVQAKELTISNIQQYYVEVPEKKKFDTLTRLLDIQSP
ELAIIFGRTKRRVDELSDALNVRGYSAEGIHGDLSQAKRMSVLRKFKEGSIDVLVATDVA
ARGLDISGVTHVYNFDIPQDPESYVHRIGRTGRAGKSGLAITFVSPREVSYLHHVERVTK
RKMDKMKAPTLDEALEGQQKMSMEKITQAVEAENLGFYRNAAEQLLEEHDAITLVSAALK
LFTKEPDETPIRLTEEAPMHSRRDRGGNRGGGDRNRGGGDRNRSGGQGGSKGNWSKRPSG
KPGSGSGSRDASAKRQGFKRSSRKERV
NT seq
1524 nt
NT seq
+upstream
nt +downstream
nt
ttggcgttttttaaagatttaggtttatcagatgatatcatgcagtcaatcaacagaatg
gggtttgaagaagctacccctatccaatcggaaacaattcctgttgcactagaagggaaa
gacgtaatcggtcaggcccaaactggtacaggtaaaacgattgcgtttggtctgccattg
cttgaaaatgttgatgtgaaaaatgaatccatccaagggatcgttatcgccccaacgcgt
gaactagcaatccaagtagctgaggaaatttacaaagctgcttatcataaacgtgtacgt
gtactttctgtatttggtggccaggacatttcaagacagatccgttcattgaaaaagaac
cctcacatcgtagttggtactccaggtcgtctacttgaccatatcaaccgtaagactctt
cgtcttcaaaatgtgaacacggttgttcttgatgaagcggatgaaatgctaaacatggga
ttcatcgaggatatcgaaaaaatccttgctgaaacaccagaacaaaaacaaacattactt
ttctctgctacaatgcctgcacctatccgtgcaatcgctgagcgtttcatgagcgagcct
gtaagtgtaaaggtacaagcgaaagaactaacaatatccaacatccaacaatactacgtg
gaagttcctgaaaagaaaaagttcgatacattgactcgtcttcttgacattcaatctcca
gagcttgcaatcatcttcggacgtacgaagcgtcgtgtagatgagctatctgacgcattg
aacgtgcgtggatactctgcagaaggaatccacggtgacctttctcaagcgaaacgtatg
agcgtacttcgcaagttcaaagaaggttccatcgatgtacttgttgcaacagacgtagca
gctcgtggacttgatatctcaggtgtaacacacgtatataactttgacattccacaagat
cctgaaagctatgttcaccgtatcggacgtacaggtcgtgctggtaagagcggattggcg
atcactttcgtcagccctcgtgaagtcagctacctgcaccatgtagagagagtgacaaaa
cgtaaaatggataagatgaaggctccgacactggacgaagcgctggaaggccaacaaaaa
atgtccatggagaaaattacgcaagcagttgaagctgaaaatcttggcttctaccgcaat
gcagcagagcaattattagaagagcatgatgcaattactttagtatctgcagcccttaaa
ttgttcacaaaagagccggatgaaactcctatccgcttgactgaagaagcgccaatgcac
tcaagaagagaccgtggcggcaaccgtggtggcggagatcgcaatcgtggcggtggagac
cgtaaccgtagtggcggccaaggcggcagcaaaggcaactggtctaaacgtccaagcggc
aaacctggatcaggatctggttccagagacgcaagcgcaaaacgtcaaggattcaaacgc
tcttcccgtaaggaacgcgtataa
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