Blautia hansenii: CGC63_00910
Help
Entry
CGC63_00910 CDS
T05095
Symbol
mfd
Name
(GenBank) transcription-repair coupling factor
KO
K03723
transcription-repair coupling factor (superfamily II helicase) [EC:
5.6.2.4
]
Organism
bhan
Blautia hansenii
Pathway
bhan03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CGC63_00910 (mfd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhan03400
]
CGC63_00910 (mfd)
Enzymes [BR:
bhan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CGC63_00910 (mfd)
DNA repair and recombination proteins [BR:
bhan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
TRCF (transcription-repair coupling factor)
CGC63_00910 (mfd)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRCF
UvrB_inter
DEAD
Helicase_C
CarD_TRCF_RID
ResIII
Cas3-like_C_2
UB2H
nSTAND3
UvrB_3rd
nSTAND_NTPase5
AAA_22
RecG_dom3_C
MFD_D3
CDI_toxin_EC869_like
Motif
Other DBs
NCBI-ProteinID:
ASM68179
UniProt:
C9LCA3
LinkDB
All DBs
Position
185455..189003
Genome browser
AA seq
1182 aa
AA seq
DB search
MQVFMQPLENLKEFEEITQKLPKNEGILQLSGCVETQKAHIMYGLFEAMKKKTGQEKANC
LIIAENDLKAKELYEDYRLYNREVMFYPAKDLIFFEADVHGNLLTKERMKVLAALLEKKG
VTVITSMGGCMDYLLPLETIEKHVLHFQSDSPLDMDKLKKQLLGMGYEKNAQAEAPGQFS
FRGGIIDIFPLTEDNPVRIELWGDEIDSIRSFDAESQRSIENLDEITIYPAAEMLLSDEV
LKKGIKKIQKDRDAAVQKFRDAFLTEEAGRLKQVVTETLENLTEFHDFSAAEHFLRYFYK
DVVTFTDYFDTENTLILLDETNRLLEQAQAVETEFRESMEHRLEKGYLLAGQTDLLISTR
QIQQKINRKNCVSLCTIEQHKGDWDITEQYYITAKSVSPYNNSFELLVKDLKRFKKEGYG
VLLLSGSRTRSARLAEDLRNEELNSFYTEDMDRVIEPGEIMTAFGHAKKGFEYPLIKFVV
ITESDIFGQEKKKKRKKSEYSGKRIQSFNELSIGDYVVHENHGLGVYKGIEKITVDKVAK
DYIKIEYAGGSTLYILPNQLDMLQKYAGADARAPKLNKLGGQEWNKTKTKVRGAVKNIAK
DLVRLYAARQATQGFQYEPDTVWQREFEEMFPFEETDDQLMAIQAAKQDMESKKIMDRLI
CGDVGYGKTEIAIRIAFKAAQEGKQVVYLVPTTILAQQHYNTFVQRMKDFPVRVDLLCRF
RTPAQQKKTIADTQKGLVDILIGTHRVLSDDVKFKDLGLLIIDEEQRFGVTHKEKIKKLK
ENIDVLTLTATPIPRTLHMSLIGIRDMSVLEEAPMDRMPIQTYVMEYNEEMVREAISREL
ARGGQVYYVYNRVNDIDEVTNRVAKLVPEANVAFAHGQMQEHQLEKIMYSFINGEIDVLV
STTIIETGLDISNANTMIIHDADQMGLSQLYQLRGRVGRSNRTAYAFLMYKKNKMLKEVA
EKRLHAIREFTDLGSGFKIAMRDLEIRGAGNLLGAEQHGHMQAVGYDLYCKMLDEAVREE
KGLKQQEDFETAIDLEVNAFIPPKYIPNEYQKLDIYKRIAGIESEEEYEDMLEELMDRFG
EPPKAVQNLLAIANLKALAHKAYIKEIKQNGTDVKITMFERAKIDGAGFPQILDKYKNNL
KMKLDEVPYFMVSLKGRRPKEILDVLNILHDILMDFQELILK
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtattcatgcagcctttagaaaatctgaaagaatttgaagaaattacacaaaag
cttccaaaaaacgaaggtattttgcagctctcaggctgtgtggaaactcagaaagcccat
attatgtatgggctttttgaagcgatgaaaaaaaagacaggacaggaaaaggctaactgt
ctgattattgcggaaaatgatttaaaggcaaaagagctttatgaggattatcgtctttat
aatcgtgaggttatgttttatcctgccaaggatttgattttctttgaggcagatgtacac
ggaaatcttttgacaaaagaaagaatgaaggttttggctgcgcttttggagaagaagggc
gttacggttattaccagcatgggaggctgtatggattacctccttccccttgaaaccata
gagaagcatgtactgcattttcaaagtgacagcccccttgatatggataaactgaaaaaa
cagcttttaggaatgggatatgagaaaaatgcacaggcggaagcaccgggacagttttct
tttcgagggggaattattgatattttcccactgacagaggacaatcctgtgcgtattgag
ctttggggtgatgagattgactctatccgaagttttgatgcagaaagtcagcgttccatt
gaaaatttggatgaaattaccatttatccggcagcagagatgttgttaagtgatgaggtt
ttaaaaaagggaataaaaaaaatccagaaagacagagatgcagcagtacagaagtttcga
gatgcttttttaacagaggaagcaggcagattaaagcaggtggtaacagaaacattggaa
aatctgacagaatttcatgatttttcggcagcagagcattttctgcggtatttttataaa
gatgtagttacttttaccgactattttgatacggaaaatacgttgatactgttggacgaa
accaatcgtttgctggagcaggcacaggctgtggaaacagaatttcgggaaagtatggag
cacaggctggaaaaggggtatttgttggcagggcagacggatttattaatcagtaccaga
cagatacagcagaaaataaacaggaagaattgcgtttctctttgtaccattgagcagcac
aaaggagactgggatattacggagcagtattatattacggctaaatctgtcagcccttat
aacaacagctttgaacttttggtaaaggatttaaaacgctttaaaaaggaagggtatggt
gtgttgctgctgtcgggctcccgtacccgttcagcacgtcttgccgaggatttgcgaaat
gaggaattgaacagcttttatacagaggatatggacagagtcattgaaccgggagagatt
atgacagctttcggtcatgccaagaagggatttgaatatcctctgattaaattcgtggtg
attacggagtcggatattttcggacaagaaaagaagaaaaaacgaaagaaatccgaatac
agcggcaagcgaatacagagctttaatgagcttagtatcggagattatgtggttcatgaa
aatcatggactgggagtttataagggaattgagaaaattaccgtagataaagttgccaaa
gattatattaaaattgagtatgcaggtggaagcactctttatattttgcctaatcagttg
gatatgcttcagaaatatgcaggagcggatgccagagcaccaaaactgaataaacttggg
ggacaggaatggaataagactaagacaaaggttcgtggggcagtaaaaaacattgccaag
gatttagttcgcctgtatgccgcaagacaggcaacacagggcttccagtatgaaccggac
acggtatggcaaagagaatttgaagaaatgtttccttttgaggagaccgatgaccagctt
atggcaattcaggctgccaaacaagacatggaaagcaagaaaatcatggaccgtctgatt
tgcggtgacgtaggttacggaaagacagagattgctattcgtattgcatttaaggcggca
caggaaggaaaacaggtggtttatcttgtaccaactacaattttggcacagcagcattat
aatacttttgtacagcgaatgaaggattttcctgtaagagtggatttgttatgccgtttc
cgtacaccggcacagcagaaaaaaaccattgcagatacccagaaagggctggtagatatt
ctgattggaacacaccgggttctctccgatgatgtgaagttcaaggatttggggcttttg
attattgatgaagaacagcgctttggtgttactcataaggaaaaaattaagaagctgaag
gaaaatattgatgttcttactctaactgccacacctattccaagaacactgcacatgagt
cttattggtattcgtgatatgagtgtgctggaagaagcacctatggacagaatgcccata
cagacttacgttatggaatataacgaggagatggtgcgtgaggcaatcagcagggagctg
gcaaggggcggacaggtttattacgtttataatcgtgtcaatgatattgatgaagttaca
aatcgtgtggcaaaattagtgccggaagccaacgtagccttcgctcacgggcagatgcag
gagcatcagctggaaaaaatcatgtatagttttattaacggagagattgatgtgctggtt
tctactaccattatagaaacaggtcttgatatttccaatgcgaataccatgattatccat
gatgcagaccagatgggactttcccagctctatcagctaagaggaagggttggacgttcc
aacaggaccgcttatgcctttttgatgtataagaaaaataaaatgttaaaggaagtagct
gaaaaacgacttcatgctatccgtgaatttacggatttgggaagcggatttaaaattgcc
atgcgagatttggaaatccgtggtgcaggaaacctgttaggagcagaacagcacggacac
atgcaggcagtgggttatgatttgtactgtaagatgctggatgaggctgtgcgggaggaa
aaaggactgaagcagcaggaagactttgaaacagccattgatttggaagtaaatgccttt
attccgccgaaatatattccaaatgaatatcagaaattggatatttataagagaattgca
ggtatcgagtcagaggaagaatatgaagatatgctggaagagcttatggaccgatttggc
gaacctccaaaagctgttcagaaccttctggctattgctaacttaaaagcgctggctcat
aaggcatatatcaaggaaatcaaacaaaatggcactgatgtgaagattaccatgtttgaa
agagcaaaaattgacggggcaggatttccgcagattttggataaatataagaataattta
aagatgaagttagatgaagtgccgtattttatggtttctttaaagggaagaagaccaaaa
gagattttagatgtgctgaatattcttcatgatattttaatggattttcaagaactgata
ctgaaataa
DBGET
integrated database retrieval system
