Bartonella harrusi: NMK50_03380
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Entry
NMK50_03380 CDS
T08485
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bhar
Bartonella harrusi
Pathway
bhar03030
DNA replication
bhar03430
Mismatch repair
bhar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMK50_03380 (dnaE)
03430 Mismatch repair
NMK50_03380 (dnaE)
03440 Homologous recombination
NMK50_03380 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhar03032
]
NMK50_03380 (dnaE)
03400 DNA repair and recombination proteins [BR:
bhar03400
]
NMK50_03380 (dnaE)
Enzymes [BR:
bhar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NMK50_03380 (dnaE)
DNA replication proteins [BR:
bhar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NMK50_03380 (dnaE)
DNA repair and recombination proteins [BR:
bhar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NMK50_03380 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF1583_N
Motif
Other DBs
NCBI-ProteinID:
UTO29021
LinkDB
All DBs
Position
741619..745107
Genome browser
AA seq
1162 aa
AA seq
DB search
MTKDKSKMRDKKKSLPRFVHLRVHSAYSLLEGALKIPQIIQHAISDHTPAVAITDTNNLF
GALEFSQYCFFHGIQPIIGCQLAVDFGDENDNSHFAKGRHSSDLCSLVLLASSEIGYAHL
VRLVSRAYLDKCDTDPPHIKVSWLSSHSEGIIALTGGRGGPLNFSLAEGRKECAVERLIS
LKKIFSDRLYVELQRHSSFDKQIEAALIELAYKYEIPLVATNEAFFLNREGYEAHDALMA
VAEGQIVSNPERKRVTPDHYLKSQDEMVALFSDLPEALENSVEIALRCHTATPIRKPILP
RFVEQSIDSNRALELEDRELLDQAKAGLKMRLETVGLAEGYTIADYEQRLDYEVSVITRM
QFSGYFLIVSDFIKWAKSHDIPVGPGRGSGAGSLVAYALTITDVDPLRFSLLFERFLNPD
RVSMPDFDIDFCQERREEVIHYVQKKYGRDQVAQIITFGKLQARAVLRDVGRVLEVPYRQ
VDYLTKLVPATPGSQVELADAIKDEPKFEEEKKKDPVIGRTLDIALQLEGLYRHASTHAA
GIVIGDRPLAELVPMYRDPRSDMPVTQFNMKYVEQAGLVKFDFLGLKTLTILKMAVDFVA
RKGIKINLSNIPLDDEATYAMMARGETVGVFQVESSGMRKALIGMKPDRIEDIIALVALY
RPGPMENIPTYNARKHGEEEISSIHPKIDHLIQETQGVIVYQEQVMQIAQVLAGYSLGEA
DLLRRAMGKKIHEEMQKQRTRFVKGAVDGGVDKDQADIIFDLLAKFADYGFNKSHAAAYA
IVSYQTAYMKAHHPVEFLAASMTYDMTNTDKLNDFRREALRLGIKVIAPCVQTSHRVFEV
GDNCIYYSLAAIKGVGEAVVDHLVACRGNKPFRDLEDFCERIDPRIVNKRAMESLVCAGA
FDCFHIAREVLLASLETLHARALRILEDNASGQIDIFGMTGGLKEPLILSQTSPWLSDEK
LHREFQAIGFYFSAHPLDEYQAILAKKRVQTWAHFANAVRGGAVAARLAGTVVAKQVRKT
KSGKKMGIIHFSDTSGQYETVLFSETLSDYEEILELGKSFIITVSAENRSEGVSLRLETV
HSLEQEVLQHHKMMRLFIKKVDMLAQIEKNLHPSGNGEVGIILLQEDGVKEVEFALPNRY
KVNSRVANAMKAIQGVVDVELV
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaagataaaagtaaaatgcgagataaaaaaaaatctcttcctcgctttgttcat
ttgagagtccattctgcttattcattgctcgaaggggctttaaaaataccacaaatcatt
caacatgcaatttcagatcatacaccagcggttgctattaccgatacgaataatttattt
ggtgctttagagttttcgcaatattgtttttttcatggaattcagccgattattggctgc
cagctcgcagttgattttggtgatgaaaatgacaattcacattttgcgaaagggcgccat
tcttctgatctctgctctcttgttttattggcttctagcgagattggttatgcgcatttg
gttcgtcttgtcagtcgggcttatcttgataagtgcgatactgatccccctcatattaaa
gtgagttggctttcatcacacagtgaaggaataatcgctttaacgggtggaagggggggc
ccacttaatttttctttggcggaaggtagaaaagaatgcgctgttgaacgtttaatttct
ttgaagaaaattttttctgatcgtctttatgtggaattacagcggcatagctcttttgat
aaacaaatagaggctgcgcttattgaattagcgtataaatatgagattcctcttgttgcc
accaatgaagctttttttctgaatagggaagggtatgaagcacatgatgcattgatggca
gttgcagagggacagattgtttcgaatccagagcgtaaacgtgtcacaccagatcattat
ttgaaatcacaagatgaaatggttgcattgttttctgatcttccagaagctctggagaac
agcgttgaaattgccttgcgttgtcatactgctacacctattagaaagccaattttgcca
cgttttgtagagcagtctattgattcgaaccgtgctttagaactggaagatagggaatta
ttagatcaagctaaggctggtttaaaaatgcggcttgagactgttggattggccgaagga
tatacaattgcagattatgagcagcggcttgattatgaagtttccgttattacgcgtatg
cagttttctggctatttccttatcgtttcagatttcataaaatgggcgaagtctcacgat
atccccgttggtccagggcgcggttctggtgctggttcacttgttgcctatgcgttgact
attactgatgttgatccattacgtttttctcttctctttgaacgctttcttaatccagat
cgtgtttctatgccggattttgatattgatttttgtcaagaacgacgcgaagaagttatt
cattatgtccaaaaaaaatatggacgcgatcaagttgcccaaattattacttttggtaaa
ctacaagcacgtgcggtgttgcgtgatgttggacgtgtcttagaagtaccttatcgacag
gttgattatcttacaaaattagttcctgctacacctggaagccaagttgaattggctgat
gctatcaaggatgaacctaaatttgaggaggaaaagaaaaaagaccctgttatcgggcga
acattggatatagcgcttcagctcgaggggctttatcgccatgcatcgactcatgcggca
ggaattgttattggtgatcgtccgcttgcagagcttgttcccatgtatcgtgatcctcgt
tctgatatgcccgtgacgcaatttaatatgaaatatgttgaacaagcagggctcgtaaaa
tttgattttctgggattaaaaacacttactattttgaaaatggcggtagattttgtcgca
cgaaaggggattaaaataaatttgtcgaatatccctctcgatgatgaagcgacctatgct
atgatggcacgtggtgaaacagttggtgtgtttcaagttgaaagctctggtatgcgcaag
gcgctgattgggatgaaaccagatcgtattgaagatattattgctcttgtcgcactttat
cgtcctggtccaatggaaaatatcccaacctataatgcacgcaaacacggggaagaggaa
atttcttctattcatcctaaaatagatcatctcattcaagaaacacaaggtgttattgtt
tatcaagaacaggtaatgcagattgcgcaggtccttgctggttattcgcttggagaagcg
gatttgttgcgtcgcgctatgggaaaaaagattcatgaggaaatgcaaaaacagcgtacg
cgctttgtaaagggtgctgttgatggcggtgttgataaagatcaggcggatattattttt
gatcttttagcaaaatttgcagattatggttttaataagtcacatgccgctgcttatgcg
attgtttcctaccaaacagcttatatgaaagcacatcatcccgttgaatttttagccgcc
tcaatgacatatgatatgacaaatacagataagttaaatgattttcgacgtgaagcatta
aggctaggtattaaggtgattgcaccttgtgtgcaaacatcacatcgtgtttttgaagtt
ggtgataactgtatttattattctcttgctgctattaaaggggtaggggaagccgttgtt
gatcatcttgtcgcttgccgtggaaataaaccttttagagatttagaagatttttgtgag
cgtattgatccccgtattgttaataagcgtgcgatggaaagtttggtttgtgctggtgct
tttgattgctttcatattgcccgtgaggttttattggcaagtcttgaaacacttcatgca
cgtgcacttcgtattctcgaagacaatgctagtggacagattgatatattcgggatgaca
ggtggattaaaagagcctttgattttatcgcaaacatctccttggttatcagatgaaaag
cttcatcgagaatttcaagcaataggtttttatttttctgcgcatcctttggatgagtat
caagcgattcttgctaaaaaacgcgtacagacgtgggctcattttgccaatgccgttaga
ggaggagctgttgccgctagacttgctggaactgttgtagcaaaacaagttcgtaaaaca
aaatccggtaagaaaatggggattattcatttttctgatacgagtggacaatatgagaca
gttctcttttctgagacgctttcggattatgaagagatattagagcttggaaaatctttt
atcattacagtgagtgctgaaaatcgctctgaaggtgtaagtttgcgacttgagacagtt
cattctttggaacaagaggtattacagcatcataaaatgatgcgcctttttataaaaaaa
gtcgatatgcttgcacaaattgagaaaaatttgcatcctagtggaaatggagaagttggg
attattcttcttcaagaggatggagtaaaggaggtcgaatttgcacttccaaaccgatat
aaggttaattcacgggtggcaaatgctatgaaggcaattcagggtgttgttgatgtggaa
ttggtttaa
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