Bartonella harrusi: NMK50_03405
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Entry
NMK50_03405 CDS
T08485
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
bhar
Bartonella harrusi
Brite
KEGG Orthology (KO) [BR:
bhar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhar03016
]
NMK50_03405 (rnd)
Enzymes [BR:
bhar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
NMK50_03405 (rnd)
Transfer RNA biogenesis [BR:
bhar03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NMK50_03405 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
FAM47
GN3L_Grn1
Motif
Other DBs
NCBI-ProteinID:
UTO29026
LinkDB
All DBs
Position
complement(751926..753080)
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AA seq
384 aa
AA seq
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MMNLITQTTDLEIAIAALRNSDFVTVDTEFIRETTFWPQLCLIQLASPDVTLLIDPKAPD
INLQAFFDLMVDKKIIKVFHAARQDIEAIYHLKGIIPYPLFDTQIAGSICGFGDSISYDQ
IVQRCTGHQIDKSSRFTDWGYRPLSEKQLLYALADVTHLRDVYFFLKKQLEKNQRTHWMD
DEIAILLNPKTYDMPEDEAWKKVKGKVKKLRELAVLQKIAAWRERKARKYNIPRRHIMKD
ECLIEIATQQPKDESALKRLRSLNKNWDKFSNTQTLIKAIHEGLEIDLATLPPLPKYNPL
GETSTAVIELLKVLLKLVANENGIAPKIIATSNDLEKIANGCIKKKIPAMNGWRYEIFGQ
KAEQMLKGQIGFYFHDGKITTKQF
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgatgaatcttattacacaaacaacagatcttgaaattgccattgctgctttacgtaac
tcagattttgtaacagtagatactgaatttatccgcgaaacaacgttttggcctcaactg
tgtttaattcagcttgcatcaccagatgtcacactgctgattgatccaaaagcaccagat
attaatttacaagcattttttgatctcatggtcgataaaaaaatcatcaaagtttttcac
gctgcacgtcaagacatcgaagctatttatcatcttaagggcatcattccctatcctctt
ttcgatacgcaaatcgcaggctcaatttgcggatttggtgattctatctcctatgatcaa
attgtacaacgctgcacggggcatcaaattgataaatcatctcgttttacagattggggt
taccgccctctttccgaaaaacaactcctctatgcacttgccgatgtaacccatctaaga
gacgtttacttcttcttaaaaaagcaattagaaaaaaaccaacgcactcactggatggat
gatgaaatagcaattctcttaaatccaaaaacttatgatatgcccgaagatgaagcatgg
aaaaaagtaaaaggcaaagtaaaaaaactgcgtgaacttgccgtattacaaaaaatagcc
gcttggcgtgaacgcaaagcacggaaatataatatcccacgtcgtcatatcatgaaagat
gaatgtcttatcgaaattgcgacccaacaaccaaaggatgaatctgctttaaaacgtttg
cgcagtctaaataaaaattgggataaattttccaacacacaaacattaatcaaagctatc
catgaaggattggagatcgatcttgctaccttacctccccttcctaaatataatccactg
ggtgaaacatcaacggctgttattgagcttctcaaagtcttattaaagctcgttgcgaac
gaaaacggtattgcacctaaaattattgcaacttccaatgatttagaaaaaattgcaaat
ggctgtataaagaaaaagatccctgctatgaatggttggcgctacgaaatatttggtcaa
aaagctgaacaaatgctcaagggccagatagggttttattttcatgatgggaaaataaca
actaaacagttttaa
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