Bartonella harrusi: NMK50_05025
Help
Entry
NMK50_05025 CDS
T08485
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
bhar
Bartonella harrusi
Pathway
bhar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMK50_05025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhar03019
]
NMK50_05025
Enzymes [BR:
bhar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NMK50_05025
Messenger RNA biogenesis [BR:
bhar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NMK50_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UTO29389
UniProt:
A0ABY5EVE7
LinkDB
All DBs
Position
1065288..1066667
Genome browser
AA seq
459 aa
AA seq
DB search
MLNINNVFTKLGLSPLLIKNLLSAGMRKPTSIQEQAIPVMLKGHDILGIAQTGSGKTLAF
GLPILSQILALGDKRSPKTARALILVPTRELAVQVDETIRAVAKGTHLSTCLVFGGVSRL
KQIKRINAGVDVLIATPGRLRDLVREKCVDLSQTRFLVLDEADRMLDMGFINDVRQIAKL
LHQEHQSALFSATMSKEITALAKCLLNEPLKIEVSPQGTTTAEISQKLYCVSTREKKNVL
GKLLTNAAFTSVIVFTRTKHGADAVTRSLTKRGYCVATIHGNKSQNARQSALKAFRDKAV
QILVATDIAARGIDIPGISHVINYDLPDEAESYVHRIGRTGRNGASGEALTLFDEGVEGA
RLRAVERLIRMRLAREDIPEQFAAFPEKPIVSEGEERGNEKKSRFRKSKRQKRFLNCKDK
AEELQDKNSPSPSKKHKKAKAAVKRKKLFRFRKSMKKAA
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
attttgaatataaataacgttttcacaaaattaggtttgtctcctcttttgattaaaaac
ttgcttagtgctggtatgcgtaaacctacatctattcaagaacaggcaattccagtgatg
ctgaaagggcatgatatattagggattgcacagacgggctctggaaagaccttagcattc
ggtttgcctattttaagtcagattttggctttgggagataaacgttcccctaaaactgcg
cgcgcgttaatcttggttcctacacgtgagcttgctgttcaggttgatgaaacaattcgt
gctgttgcgaaaggaacgcatctttcaacatgtcttgtttttggtggagtatcacgttta
aaacaaattaaacgtataaatgcaggggtggatgttttaatagcaacaccaggccgttta
agagatcttgtccgtgaaaaatgcgtcgatctgtctcaaacgcgttttttggttctggat
gaagcagatcgtatgttagatatgggctttattaatgatgtacggcaaatcgcaaagctt
ttgcatcaggagcatcagtccgcactcttttctgcgacaatgtcgaaagagattaccgca
cttgcaaagtgtttgctcaatgagcccctgaaaatagaagtttctcctcaagggacgaca
actgcggagatcagccaaaagctctattgtgtttctacgcgtgaaaaaaagaatgtttta
ggtaagcttttgacaaatgcggcttttacttctgttattgtttttaccagaacaaagcac
ggtgctgatgctgtcacacgtagtctcacaaagagagggtattgtgttgcgacaattcac
ggaaataagtcacaaaatgctcgtcagtctgccttaaaagcttttcgtgacaaagcagta
cagatccttgttgcaacagatattgcagcacgcggaattgacatacctggaataagccat
gttattaattatgatttaccagatgaagctgaaagttatgtgcatcgtatcggtcgcaca
ggacgcaatggtgcttctggtgaagcactcaccctttttgatgaaggtgtagaaggagca
cggttgcgggctgtagagcgtttgattcgtatgcgtttagcacgtgaagatattccggaa
cagtttgctgctttcccagagaagccgattgtatcagaaggtgaagaaagaggaaatgaa
aaaaaatctcgttttagaaaatctaaacgtcagaagcggtttttaaattgtaaagataaa
gctgaagaattacaggataaaaattctccttctccaagtaaaaaacacaaaaaagcaaaa
gcagccgtaaaacggaagaagctttttcgttttcgcaagtcaatgaagaaggctgcttga
DBGET
integrated database retrieval system
