Bartonella harrusi: NMK50_06750
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Entry
NMK50_06750 CDS
T08485
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
bhar
Bartonella harrusi
Brite
KEGG Orthology (KO) [BR:
bhar00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NMK50_06750 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhar03021
]
NMK50_06750 (rpoD)
Transcription machinery [BR:
bhar03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NMK50_06750 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
UTO27925
UniProt:
A0ABY5EU22
LinkDB
All DBs
Position
complement(1420587..1422599)
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AA seq
670 aa
AA seq
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MATKVKQKDNVEVISQASLDSPLLDFSDDAIKKMVKLAKKNGYVTMDELNAVLPSEEVTS
EQIEDILAMFSEMGINVVDDEDEIDSEPDVEEVTVEGGDLVEASSHAIATTTNKREITDR
TDDPVRMYLREMGAVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQALIIWREELRE
QRILLREIIDLEMTYAGPEAKQAPIVERSEVDKIKEEKISSSIRNMEGIAGERNTEDEDE
DDDEANLSLAAMENELCPQVMETLDFIAQTYIKLRKLQDQHVESSLAERKEGALTPSQRK
KYMQLKGELVQAVKSLSLNQNRIESLVEQLYDINKRLIHNEGKLKRVANSYGIGHEDFLK
EYQGRELDADWVNYVATLPGSGWKEFSRREAKEIQRLRSEIQNLAQETAISIGEFRCIVT
QVQKGERESTIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRR
GYKFSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQILHEIGREPTPEEL
SSKLSMPLEKVRKVLKIAKEPISLETPVGDEDDSHLGDFIEDRNALLPIDAAIQANLRDT
TTRVLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSR
SRKLRSFLDS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggttaaacagaaagataatgtggaagtaataagccaagcgagtttggat
agccctcttcttgatttttctgatgacgccattaagaaaatggttaagcttgctaaaaaa
aatggttatgtgacgatggacgaactgaatgcagttcttccatctgaagaggttacgtct
gaacaaattgaagatatcttggcgatgttttctgagatgggtattaatgttgtcgacgat
gaagatgaaatcgattctgaacctgatgtagaagaagttacagtagagggcggagatctc
gtcgaggcttctagtcacgcgatcgcaacgacaacgaacaagcgtgaaattacagatcgt
acggatgatcccgtgcgtatgtatttacgtgaaatgggtgctgttgagttgctgtcgcgg
gaaggcgaaattgctattgccaaacgtatcgaagcagggcgggagacaatgattgcaggg
ctttgtgagagccccttgacttttcaagccctcattatttggcgggaagaattgagagag
cagcgtatccttcttcgtgaaattattgatcttgaaatgacttatgctggtcccgaggca
aagcaggctcctattgttgagcgaagtgaagttgataagataaaagaggaaaaaatatct
tctagcatacgtaatatggagggaattgctggagagagaaacactgaggacgaggatgaa
gatgatgacgaagcgaatttgtcacttgctgcaatggaaaatgaactctgtcctcaagtc
atggaaacattggattttattgcgcagacttatataaaattgcggaaactacaagatcag
catgttgagagcagtttggcagagcgtaaagagggcgctcttacaccgtctcagagaaaa
aaatatatgcaattaaagggtgagttggttcaagccgtaaaatccctttcgttgaaccaa
aatcgtatcgaatctttggttgagcaactttatgacatcaataagagacttattcataat
gagggtaagctgaagcgggttgctaatagttatggtattggtcatgaggattttttaaaa
gaatatcaaggacgtgaattagatgccgattgggtaaattatgttgcgactttaccagga
tcggggtggaaagaattctcaaggcgtgaagcaaaagaaattcaaaggttgcgtagcgaa
atacaaaatcttgcacaagaaaccgctatttcaattggcgaatttcgttgcattgttacg
caggtgcaaaaaggtgaacgcgaatcaacaattgctaaaaaagaaatggtagaagctaat
cttcgtctcgtcatttcaattgcaaaaaaatacactaatcgtggtttgcagtttcttgat
cttattcaagaaggaaatattggcttgatgaaagccgtggataaatttgaatatcgccgt
ggatacaaattttcaacttatgcaacatggtggattcgtcaggcaattactcgttctatt
gctgatcaggcacgtactattcgtatccctgttcatatgattgaaacaattaacaaaatt
gttcgtacatcacgacagattctccatgaaattggacgcgagcctacaccagaagaattg
tctagcaaactttctatgccgttagaaaaagtacgaaaagtccttaaaattgcaaaagag
cccatttcacttgaaacacctgtaggtgatgaagatgattcgcatttgggcgattttatt
gaggatagaaatgcattattgccgattgatgcagctattcaggcaaatctacgggataca
acgacgcgtgtgcttgcttcattaacaccacgtgaagaacgtgttttgcgaatgcgtttt
ggtatcgggatgaatacagatcacacgttggaagaagttgggcaacaattttcagtgaca
agggagcgtattcgacaaattgaagcaaaggcgcttcgtaagttgaagcatccaagccgt
tcacgcaaattgcgtagttttcttgactcttaa
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