Breznakiella homolactica: JFL75_00620
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Entry
JFL75_00620 CDS
T07248
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
bhc
Breznakiella homolactica
Pathway
bhc02020
Two-component system
bhc02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
bhc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JFL75_00620 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
JFL75_00620 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhc03021
]
JFL75_00620 (rpoN)
Transcription machinery [BR:
bhc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
JFL75_00620 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
LacI
Sigma70_r4
HTH_Crp_2
HTH_23
HTH_38
HTH_11
Sigma70_r4_2
HTH_IclR
MarR_2
HTH_31
HTH_AsnC-type
HTH_20
HTH_Tnp_ISL3
HTH_17
HTH_Tnp_4
Arg_repressor
HTH_3
CHGN
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
QQO09460
UniProt:
A0A7T7XN78
LinkDB
All DBs
Position
complement(2462073..2463431)
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AA seq
452 aa
AA seq
DB search
MQVQRPSLSQEQRLKMNPQLYQSIKLMELPIVDLRERIEEEVERNPALEVLEDRLTVSLD
EAYAPQKDEDTYFEESSDPGFIRKGGDSDADEQNKFIEGALSRPETLQEHLLWQLRLQPV
DDAIRRIGERLIQNLNADGFNEEPLPALLKGKDPAAVEAALSLVRSLDPQGTCTADYRES
LRVQAKLLPEAPPGLEDALEYLELLERGKLAELGKKINRTEDEVRLIADRIKELSPFPGR
QFSTEDTRYVVPDVQVIRKEGEFVIVLNEEEIPVLGINPFFMKISGGKEEEKTARDFARE
NIKEARWFIQSINQRNHTLLRVSRAIVEFQRSFFANGPKYLAPLTLKDIAQELGVHETTV
SRTANGKYMQTEWGIFEIKHFFTNSISGAGSGGSRYSKEGVKEIIRELIQSEARNFSDQE
LSDLLAQKGIPLARRTVAKYRKELDFGSSYTR
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
gtgcaggtgcagcgtccgtcgttatcccaggaacagcgactcaaaatgaatccccagctc
tatcagtcaatcaagctgatggagcttcccattgtggatctgcgggaacggattgaggaa
gaggttgaacggaatcctgccctggaggtgctggaggaccgcctgacggtctccctggac
gaggcgtacgctccgcagaaggatgaggatacctactttgaggagtcctcagaccccgga
tttatccggaaaggcggcgacagtgacgccgatgagcagaataaattcatagaaggcgcc
ctttcccggccggaaaccctgcaggaacacctcctgtggcagctgcgcctgcagccggtg
gatgacgcgatccgccggataggggaacggctcatacagaacctcaacgccgacggtttc
aatgaagaaccccttccggcgctgcttaaaggtaaggatcctgctgcggtggaagctgcc
cttagcctggtccgttccctggacccccaggggacctgcacggcggattaccgggaatcc
ctcagggttcaggctaaactccttccggaagcgcctccggggctggaagacgccctggaa
tacctggaactgctggagcggggaaaactggcggagctcggaaaaaaaataaaccggacc
gaagacgaggtccggctcatcgcggatcggataaaggaactttctccctttccgggccgg
cagttttccacagaggatacccggtacgtggtcccggatgtacaggttatacggaaggaa
ggggaatttgtcattgttctgaacgaggaggaaatccccgtgctggggatcaatccgttc
ttcatgaaaatttccggcggaaaggaagaggagaaaacggcccgggattttgcccgggaa
aatatcaaggaagcccgctggtttatccagtccataaaccagcgcaaccacaccctgctc
agggtttcccgggccattgttgaattccagcggtctttttttgccaacggaccaaagtac
ctcgcgcccctgacccttaaggatattgcccaggaactgggagtgcacgaaaccaccgtg
tccaggacggccaacggtaaatacatgcagacggaatggggaatttttgagatcaagcat
ttctttaccaattccataagcggcgccggatccggaggatcccggtattccaaggaaggg
gtcaaggaaataatccgggagctgatccagagcgaagccagaaacttttccgaccaggaa
ctgtcggatctgcttgcccagaaaggcatcccccttgcccgccggaccgtggcaaaatac
cggaaggaacttgacttcggttcatcctacacaagatga
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