Breznakiella homolactica: JFL75_04125
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Entry
JFL75_04125 CDS
T07248
Name
(GenBank) hypothetical protein
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
bhc
Breznakiella homolactica
Pathway
bhc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
bhc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
JFL75_04125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhc03400
]
JFL75_04125
Enzymes [BR:
bhc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
JFL75_04125
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
JFL75_04125
DNA repair and recombination proteins [BR:
bhc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
JFL75_04125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
zf-FPG_IleRS
Fapy_DNA_glyco
Auto_anti-p27
NFACT_N
NAPRTase
Ribosomal_S13
DNA_ligase_ZBD
Motif
Other DBs
NCBI-ProteinID:
QQO11311
UniProt:
A0A7T7XRT1
LinkDB
All DBs
Position
3235423..3236259
Genome browser
AA seq
278 aa
AA seq
DB search
MLEIPESHTLAAQLNETVGGKTITRVIAAAAPHGFAFYFGDPGNYPKLLEGEKIRNAAAY
AGLTEISAGGKRILFGDGTNVRYLEPGAEPPKKHQLLVTFGDGSSIVCTIQMYGGIWAFP
DGKNDSPYYKVAKEKPSPLSDAFDEGYFMTICGEAKPTLSAKALLATEQRIPGLGNGVLQ
DILFTAGINPKNKINTLTQKDLKGLYKSIRKTLKAMTDKGGRDTEKDLFGKNGGYKTILS
NNTLKDPCPVCGGTIIRQAYLGGNVYYCPVCQPLKKQP
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgctcgaaattcccgaaagccataccctggcggcgcagcttaacgaaactgtcggcggt
aaaaccattacccgggtcattgccgccgccgctccccacggattcgccttttatttcggc
gaccccggaaattacccaaaactgctggagggtgaaaaaatccggaatgccgccgcttac
gcgggcctgacggaaataagcgccggcgggaaacggattctcttcggcgacgggaccaat
gtccggtaccttgagcccggagctgagccgccgaagaaacaccagctcctggtcaccttc
ggcgacggttcctcgattgtctgcaccatccagatgtacggcggtatatgggcgtttccc
gacgggaaaaacgacagtccttactataaggttgccaaagaaaagcccagccccttgtcc
gacgcctttgatgaagggtacttcatgaccatctgcggcgaagcgaaaccaaccctcagc
gccaaggcgctgctcgccacggagcagcgtattcccggactcggcaacggtgtgctccag
gatatccttttcaccgcggggataaatcccaaaaacaaaattaataccctgacacagaag
gatctcaaggggctgtacaaaagcatcaggaaaaccctcaaagccatgaccgacaaaggc
ggcagggatacggaaaaagatctcttcggaaaaaacggcggatacaaaaccattctgtca
aacaacaccctcaaagatccgtgcccggtctgcggcgggactattatcaggcaggcgtat
ctcggtggcaatgtgtattactgccccgtatgccagccccttaaaaagcagccgtaa
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