Breznakiella homolactica: JFL75_04210
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Entry
JFL75_04210 CDS
T07248
Name
(GenBank) RtcB family protein
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
bhc
Breznakiella homolactica
Brite
KEGG Orthology (KO) [BR:
bhc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
bhc03016
]
JFL75_04210
Enzymes [BR:
bhc01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
JFL75_04210
Transfer RNA biogenesis [BR:
bhc03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
JFL75_04210
Prokaryotic type
tRNA splicing ligases
JFL75_04210
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
CSS_CxxC
Motif
Other DBs
NCBI-ProteinID:
QQO10130
UniProt:
A0A7T8BBJ9
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All DBs
Position
3253493..3254653
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AA seq
386 aa
AA seq
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MAEPLRIRGLHNEALVFARAVEMKCEDQILQYLNHEAFADTTVRIMPDVHAGKGAVVGFT
ATSNEFAVPSLVGADIGCGVCAYKLGRIQLRAEKLDAFIRRHIPSGTGIRPAMHGRVEDA
WNCLPSPAPFSFGEFKGSLREICKTLDLSLPRVFCSLGTLGGGNHFIEIDRDDRRDYWLL
IHSGSRGFGLRTAKYHEAAAAEKTGPDSPIKYLTDEAREAYIQDTRTAQEFARLNRTLMA
LLIIEGFFRKPMDEIECIESIHNYIDFSDGIVRKGAIAARKDQPVVIPFSMADGAVLGTG
RGNADWNCSAPHGAGRKMSRSQARGGLSMDEYRKRMRGIWTSCVSEKTLDESPMAYKKTG
DVLAFLGETVDVSRRLLPEYNFKAAE
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacctctccgtatccgcggcctccataatgaagccctggttttcgccagggcg
gtggaaatgaaatgcgaggaccagattctccagtacctcaaccacgaagcgttcgccgat
accaccgtccggattatgcccgatgtgcatgcgggaaaaggcgctgttgtggggtttacc
gcgaccagcaatgaattcgcggttccttccttggtcggcgccgacatcggctgcggcgtc
tgcgcctacaaactcggacggatacagctccgggcggaaaaactcgacgcttttatccga
aggcatattccttcggggaccggtatccggccggccatgcacgggcgcgtggaagacgcc
tggaactgcctgccgtccccggcgccgttttccttcggcgaattcaaagggagcctccgg
gaaatctgcaagaccctggatctgtcactgccgcgggttttctgttccctgggaaccctg
ggcgggggaaatcattttatcgaaattgaccgggacgaccgccgggattattggctcctt
atccacagcggaagccgcggattcgggctccggaccgcgaagtaccacgaggccgcggcg
gcggaaaaaaccggtccggacagtcccataaagtacctcaccgatgaagcccgggaggcg
tacatacaggatacgcggacagcccaggaattcgcccgcctcaaccggacccttatggcg
cttcttattatagaagggtttttccggaaacccatggatgaaatcgaatgtatcgaaagt
atccacaattatatcgatttttccgacgggattgtgcgcaagggcgccatcgccgcccgg
aaagaccagcccgtggttatccctttttccatggccgacggtgccgtacttggcacgggc
aggggtaatgctgactggaactgttcggcgccccacggggcggggcggaaaatgtcgcgg
tcccaggcccggggcgggttatccatggatgaataccggaagcggatgcggggtatctgg
acgagctgcgtcagcgagaaaacccttgacgagagtcccatggcctacaagaaaaccggg
gatgtcctggctttcctcggagaaaccgtggacgtaagccggcggcttcttccggaatac
aattttaaggcagccgagtaa
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