Breznakiella homolactica: JFL75_06185
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Entry
JFL75_06185 CDS
T07248
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
bhc
Breznakiella homolactica
Pathway
bhc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JFL75_06185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhc03019
]
JFL75_06185
03009 Ribosome biogenesis [BR:
bhc03009
]
JFL75_06185
Enzymes [BR:
bhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
JFL75_06185
Messenger RNA biogenesis [BR:
bhc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JFL75_06185
Ribosome biogenesis [BR:
bhc03009
]
Prokaryotic type
rRNA helicases
JFL75_06185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_30
AAA_22
CMS1
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
QQO10499
UniProt:
A0A7T7XQ68
LinkDB
All DBs
Position
complement(3699070..3700800)
Genome browser
AA seq
576 aa
AA seq
DB search
MTLDNSVTFSSFGLSEPVLAALERKGFSAPSSIQTIAIPRLLSDEGHVIVKARTGTGKTA
AFGIPLVERITETGKKPRALILTPTRELAIQITREIRSLAGSPVPRICTVYGGASIRTQI
KELRDGVEIVAGTPGRVMDLMERKVLDLSAIEWFILDEADEMLDMGFLDDVEKILSETNP
GRRVALFSATMPEAILKIVRQHIGKTDILEDTAPADETPLTEQYFMVLRKEDKLEALRRI
ADSSDEFYGLVFCATKAGADEAARRLLDAGYAAEAIHGDLSQEARERTLRRFRSRLTTML
VATDVAARGIDIERLTHVINWDLPNDRETYVHRIGRTGRAGRKGMAVTFVIPSEMGRITH
LSRSMERTLGSSIKRLGVPKVEDIMAAGRKRIITSVCAAAEEQQIAESSADNPDREDKQP
AAELARELIETLGPEKAVQALVNLSYGDTLDPSRYRTVSEFAEGPVHGRDRDYTRRWEGS
QGSGPRDRNRRGPPVSKHGQSRVYVGVGRRHGASARDVAGLLMRAGGIPGKMVDAIEMKD
FCAFATMPEDAAKRAYSFARRDPEHPAIKPASPEKH
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgacgttagacaattcagttactttctcatcgttcgggctgtccgaacctgtgcttgcg
gcgctggaacggaaaggtttttccgctcccagctcaatccagaccattgccatcccgcgg
cttctctcggacgaaggccatgtgatcgtaaaagccagaaccggaaccggcaaaaccgcc
gccttcgggattcctctggtggaacggatcaccgaaaccgggaaaaagccccgggcgctg
attctcacgccgacccgggaactggcaatccagatcaccagggaaatccgttccctggcg
ggcagtccggttccccggatctgtaccgtgtacggcggcgcgtctatccggacccagatc
aaggaactccgggatggcgtcgaaatcgtcgccggaaccccgggacgggttatggatctt
atggaacggaaagttttggacctttcggctatcgaatggttcatcctggacgaagccgac
gaaatgcttgatatgggcttcctcgatgatgtggaaaaaatcctttccgaaaccaatccc
ggacggcgggtggccctcttttcggcaaccatgccggaagccattctgaaaattgtccgg
cagcatatcggcaaaacggatatcctcgaagatacggccccggcggatgaaacaccgctg
acggagcagtattttatggttctcaggaaagaggacaagcttgaagccctgcggcgcatc
gccgattcgtcggatgaattttacgggcttgttttctgcgccaccaaggccggcgccgat
gaggcggcccggcgccttctggacgcgggatacgcggctgaagcgattcacggggatctt
tcccaggaagcccgggaacgcacgctgcggagattccgctcacggctgacaaccatgctg
gtcgccaccgatgtggcggcccggggtattgatattgaacggctgacccatgtaatcaac
tgggatcttcccaatgaccgggagacctatgtccaccggatcggccggaccgggcgcgcc
ggccggaaaggcatggccgttaccttcgtgatcccctcggaaatgggaaggatcacacac
ctgtccagaagcatggaacggaccctggggagcagcattaaacggctgggcgtccccaaa
gtggaagacatcatggctgccggaagaaagcgcattataacctcggtatgcgccgcggcg
gaagaacagcagattgccgaatcctccgcggacaatccggacagagaagataaacaaccc
gccgccgaactggcccgggaactcatcgaaacactgggaccggaaaaggcggtccaggcc
ctggtaaatctatcctacggggataccctcgatccgtcacggtaccggactgtcagtgaa
ttcgccgaagggccggtacatggacgggaccgggactatacgcggcggtgggaaggcagc
cagggaagcggtcccagagacagaaaccgccgggggccgccggtttccaaacacggccag
tcccgggtatacgtaggggtcggccgcagacacggcgcctcggcgagggacgtggcggga
ctccttatgcgggcgggaggtattcccggaaaaatggtggatgccatcgaaatgaaggat
ttctgcgcctttgccaccatgccggaggacgcggcaaaacgggcctacagctttgcccgc
cgcgatcccgaacatccggccataaagccggcttccccagaaaagcactga
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