Breznakiella homolactica: JFL75_07710
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Entry
JFL75_07710 CDS
T07248
Name
(GenBank) RecQ family ATP-dependent DNA helicase
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
bhc
Breznakiella homolactica
Pathway
bhc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JFL75_07710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhc03019
]
JFL75_07710
03400 DNA repair and recombination proteins [BR:
bhc03400
]
JFL75_07710
Enzymes [BR:
bhc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JFL75_07710
Messenger RNA biogenesis [BR:
bhc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
JFL75_07710
DNA repair and recombination proteins [BR:
bhc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JFL75_07710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
RecQ_Zn_bind
Helicase_C_2
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
QQO10793
UniProt:
A0A7T7XQU1
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All DBs
Position
complement(4050969..4052558)
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AA seq
529 aa
AA seq
DB search
MGKSEPGDTAELSDPLRGAAADLFGMKYLFPYQRLVITNILGAAAASGIPVNWPENRNNQ
ISPGGQENSREDSDEGGDRQNLGRQIVILPTGAGKSLCFQLPAMLLGGPTLVIYPILSLM
ADQQRRLEERGFSPVTLRGGQSAEERDQIREKVVSGKSRFIIANPEVLLVPKVLAMLESW
GIVHIVIDEAHCVSEWGESFRPSYLEIGKIIDAAKTNLITAFTATASDPVLEKINSYIFG
GNGAHRIIGNPNRINIHYAARGAVLRDMAVRDSILAHPRPAIVFCSSRPGTERLARYLRE
QLRDREIRFYHAGLDREEKAAVEQWFFANKNAILVSTCAYGMGVDKPDIRTVIHRDCPPT
VEAYLQESGRAGRDGLPSEAILIWGPDDRAAAERIGKEADRRRFEALLTYARNIGACRRE
QLLSLLNYTGAGESPEDSCCDVCGKTASPELREIKSILGFFRRNRRWYTVKEAAEVLAGM
DTVQWEKEEIRTALGYCLRSGLLKQGKGPFWKGKISPAERVNPSGHLQY
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagagtgaacccggggacacagcggagctgagtgatcccctccgcggagccgcg
gcggatttattcggaatgaaatacctctttccctatcagcggctggtgataaccaatatt
ctgggggccgccgcggcatcgggcatacccgtaaactggccggagaatcggaataaccag
attagccccggcgggcaggagaactcacgggaagatagtgacgagggcggcgaccggcag
aacctgggccggcagatcgtaatcctccccacaggggcgggcaaatccctgtgtttccag
cttcccgccatgctgctcggtggaccgaccctggtgatctatcccatcctgtccctcatg
gccgaccagcagcgccgcctggaggagcgggggttcagcccggtcacactccggggtggt
cagagcgcggaagaacgggatcaaatccgggagaaggttgtttccggaaaaagccgtttt
attatcgccaatcccgaggttcttctggtgccgaaggtactcgccatgctggaatcatgg
ggcattgtccacatcgtcatcgacgaagcccattgtgtcagcgaatggggggaaagcttc
cggcccagttatctggaaatcggaaaaataatcgacgcggcaaaaaccaatctcataacg
gcatttaccgcaaccgcttccgacccggtgctggaaaaaataaattcctatattttcgga
ggaaacggggcgcaccggattatcggcaatcccaaccgtatcaatattcactacgcggcc
cgcggagcggtactccgggacatggcagttcgggacagtattcttgcacacccccgcccg
gcaatcgtgttctgttcttcccgccccggaacggaacgtctggcccggtacctccgggaa
cagctacgggacagggaaatcagattctatcatgcgggcctggaccgggaagaaaaggcc
gccgttgaacagtggtttttcgccaacaaaaacgcgattctggtcagtacctgcgcttac
gggatgggtgtggacaaacccgatatacggaccgtaatccaccgggactgcccgccgacg
gtagaagcctaccttcaggaatccggaagagccgggcgggacggactcccgtcagaggca
atccttatctggggacccgatgaccgggccgccgcggagcgtattggcaaggaagcggac
cgccgccgttttgaagcgctcctgacctatgcccgcaatattggcgcatgcaggagggag
cagctcctttcactgctcaattacaccggcgccggggaatcaccggaagacagctgctgc
gatgtctgcggcaaaaccgcgtctccggaactccgggaaataaaaagcatcctcgggttt
ttccgcaggaaccggagatggtataccgtaaaggaagcggcggaagtgctcgcgggaatg
gataccgtacaatgggaaaaagaggaaatccgtacggcgttgggatactgtttacggtca
ggcctcttaaaacaggggaagggccctttctggaaagggaaaataagtcccgcggaacgg
gttaatccttcagggcacctgcagtattaa
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