Brachyspira hyodysenteriae ATCC 27164: BHYOB78_00085
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Entry
BHYOB78_00085 CDS
T04742
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
bhd
Brachyspira hyodysenteriae ATCC 27164
Pathway
bhd03030
DNA replication
bhd03430
Mismatch repair
bhd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
bhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BHYOB78_00085
03430 Mismatch repair
BHYOB78_00085
03440 Homologous recombination
BHYOB78_00085
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhd03032
]
BHYOB78_00085
03400 DNA repair and recombination proteins [BR:
bhd03400
]
BHYOB78_00085
Enzymes [BR:
bhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BHYOB78_00085
DNA replication proteins [BR:
bhd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BHYOB78_00085
DNA repair and recombination proteins [BR:
bhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BHYOB78_00085
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
HHH_3
Peptidase_M42
Motif
Other DBs
NCBI-ProteinID:
ANN62306
UniProt:
A0A3B6VV26
LinkDB
All DBs
Position
complement(1635266..1638976)
Genome browser
AA seq
1236 aa
AA seq
DB search
MSFVHLHVHTQYSILDGAARIKSLYSKKDKTKRLIPGLIDRAKELGMPGIAMTDHGNMFG
AMEFFSEAKDKGIIPIIGCEVYVAPKTRFDKKIENSEEKSAMHLILLAKDKEGYNNLCKL
VTFGYTEGFYYRPRVDHELIEKYNKGLICLSACMGGEIPIAIRKKDYKQASKLAEYYKSI
FGNDFYIELQDHNIPEEKALNSALYQLAKHHNIELVVTNDVHYVSKEDAKAHEILLAIQT
KATLDSPRRYKFPSNEFHLKTEEEMMKSFAKLPKAFENTLKIAEQCQDLNIMTKTYYMPN
YELPNGETETTALRNMCMDGLNKYYNNNIPKEAMDRLEMELGVIGKMGFEGYFLVVQDFI
NYARNHDVAVGPGRGSAAGSIVAFATGITKVNPLDYNLLFERFLNPERKSMPDIDVDFQD
DKREVIIDYVKEKYGKDNVSQIATFGALGGRSVIRDVCRVMGIDLATADRLAKSIPDDVK
RVVDIYDHPDCAALVKEIEGNRELKNMYEISTRLDGLVRNVGLHAAGVIISSHPIMDLAP
VYQDSKTGTRACQYEMTYVESAGLIKMDFLGIKNLRLIKDAIKDIKDRYGIEIDIDKIPL
DDEAVYDIFRKADTGGVFQFESPGMRQMLINIQPTGFDDLVSSVALYRPGPLNSGMDKDY
ADRKNKRKEIVYKHPDLEPILKESQGVLIYQEQIMAISRVIGGFTAAEADDLRKAMGKKI
VEKMNSMEEKFIKGGLERGYDKELLTYLFDTMKGFAEYGFNKSHSVCYALIAYQEAYIKA
HYPMEYYVALLNTVIADTDKISLYLNEIKQKNIEIVTASVFESDALFSQKDGKIVYALHA
VKGVGIHAALAIQEEREKNGQFKNLEDFVKRVDVHLVNRKVYETLIKCGAFSEFGHTESA
LLSSLDAILAHASNYQKETLSGQTMLFDSMSEDDSGSASLVIEKQVEYASNILMENEKEV
LGFSLRYHPFARYITKIDYKYFHNTLDIDNLKDKDEFLLPCVVMSASETTTKKNTPMITL
KVIDIFTEYVFYITANSQIEKYKDMLEEQTGILIKGRRDKNRFSDKIYNNIVDIKLLDSF
LKDKNLKLKEVKRDNIKREASSEMAPENKQVHVNKNDAPFKNTSNKENDIKRSDNVVSNA
PFTSRPNNSIAVKHNNSGKKQLALYMNKNIFDDMDLLCLQNAISSNPGDYTIFLKLKSES
GMEIFKIGEDYKVDPNPRFLNEAKSALRSLIEIEYA
NT seq
3711 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgttcatttgcatgtacatacacaatattcaatacttgacggcgctgcccgt
attaagtctttatattctaaaaaggataaaactaaaagacttatacctggtttaatagat
agagccaaagaattaggtatgcctggcatagctatgactgatcatggtaatatgttcggt
gctatggaatttttctctgaagctaaggataaaggtattatacctataattggatgcgaa
gtatatgtagcccctaaaacaagatttgataaaaagatagaaaactctgaagaaaaaagt
gctatgcatttaattcttcttgctaaagataaagagggttataataatctatgtaaatta
gttactttcggatatactgaaggtttctattatagaccgagagtagaccatgagttgata
gaaaaatataataaaggtttaatttgtttgtctgcttgtatgggcggagaaattcctatt
gctataagaaaaaaagattataagcaggcttcaaaattagctgaatattataaatccatt
tttggcaatgatttttatatagaacttcaggatcataatatacctgaagaaaaggcttta
aatagtgcattataccagttagctaaacatcataatatagaattagtagttacaaatgat
gtgcattatgtatcgaaagaagatgctaaagctcatgaaatacttttagctatacagact
aaagctactttagattctccaagaagatataaattcccaagcaatgaattccatctaaaa
acagaagaagagatgatgaagtcatttgctaagcttcctaaggcatttgaaaatacttta
aaaatagcagaacaatgccaagatttaaatataatgactaagacttattatatgcctaat
tatgagcttcctaatggtgagacagaaactacagcacttagaaatatgtgtatggatggt
ttgaataaatattataacaataatattccaaaagaggctatggatagacttgaaatggaa
ttgggtgttataggaaagatgggatttgaaggatatttccttgtagttcaggacttcatt
aactatgctagaaatcatgatgttgcggttggcccaggacgtggaagtgccgcaggttca
atcgttgcatttgctacaggaattacaaaagttaatccacttgattataatttgcttttt
gaaagatttttaaatcctgaaagaaaaagcatgcctgatatagatgttgacttccaagac
gataagcgtgaagttataatagattatgtaaaagagaaatatggtaaagataatgtttct
caaatagctactttcggagctttgggaggacgttctgttataagagatgtttgccgtgtt
atgggtatagatttagctactgctgacagacttgctaaaagcatacctgatgatgtaaaa
agagtagtagatatatatgatcatcctgattgtgctgctttggttaaagaaatagaaggc
aatagagaattaaaaaacatgtatgaaatatctacaagacttgacggattagtaaggaat
gtaggtttgcatgctgctggtgttattatatcatctcatcctataatggatttagcaccg
gtttatcaggattctaaaacaggcactagagcttgtcaatatgaaatgacttatgttgaa
agtgccggacttataaaaatggactttttgggtattaaaaacttaagactcataaaagat
gcaataaaagatataaaagatagatatggtattgaaatagatatagataaaattccttta
gatgatgaagctgtttatgatatatttagaaaagcagatacaggcggagttttccagttt
gaaagtcctggtatgcgtcaaatgcttataaatattcagcctacaggttttgatgactta
gtatcaagcgtagcattgtatcgtcctggtccattgaactctggaatggataaagactat
gccgatagaaaaaataaaagaaaagaaatagtatataagcaccctgatttggagcctata
cttaaagagagtcagggagtattaatatatcaagagcagattatggctataagccgagtt
ataggaggattcactgcggcagaagctgatgatttaagaaaggctatgggtaaaaaaatc
gtagagaaaatgaactctatggaagagaaattcattaaaggcggacttgaaagaggttat
gataaagagttattaacttatttatttgatacaatgaaaggtttcgctgaatacggattc
aataaatctcactctgtttgttatgcattaatagcctatcaagaagcttatattaaagct
cattatcctatggaatattatgtggctttactcaatactgttatagctgatactgataaa
atttctctatatcttaatgaaattaaacagaaaaatatagagatagttacagcaagcgta
tttgaaagcgatgctttattctctcaaaaagatggtaagatagtttatgctttacatgct
gttaaaggtgttggtattcatgctgctttggctattcaggaagagagagaaaaaaacgga
caattcaagaatttagaagattttgtaaaacgtgttgatgttcatttagttaatagaaaa
gtttatgaaactctcataaaatgtggagctttctctgaattcggacatactgaaagtgca
ttgcttagttctcttgatgcgatacttgctcatgcttctaattatcaaaaagaaacttta
tcaggtcaaactatgttatttgattctatgtctgaagatgacagcggaagtgcttctttg
gtgatagaaaaacaagtggaatatgcttctaatattttaatggaaaatgagaaagaagtt
ttaggcttttcattaagatatcatccttttgctagatacattactaaaattgattataaa
tatttccacaatactttagatattgataatcttaaagataaagatgagtttttacttcct
tgtgttgttatgtctgcatcagaaactactacaaagaaaaacactcctatgatcacatta
aaggttattgatatatttactgaatatgtattttatatcacagctaatagtcagatagaa
aaatataaagatatgcttgaggaacaaacaggaatattgataaaaggcagaagagataaa
aatagattctcagataaaatatataataatattgttgatataaaattattagattctttc
ttaaaagataagaatctcaaacttaaagaagtaaaaagagataatataaaaagagaagca
tcttctgaaatggcacctgaaaataaacaagttcacgtaaataagaacgatgctccattt
aaaaatacttctaataaagaaaatgatattaaaagatctgataatgttgtttccaatgct
ccatttacaagcagacctaataacagcatagcagtaaaacataataacagcggtaaaaag
caattagcattgtatatgaataaaaatatatttgatgatatggatttattatgtcttcaa
aatgctatatcttcaaacccaggagattatacaatattcttaaaattgaaatctgaaagc
ggtatggaaatatttaaaataggcgaggattataaagttgatcctaatcctagattctta
aatgaagccaaaagtgcattgagatcattaatagaaattgaatatgcttaa
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