Brachyspira hyodysenteriae ATCC 27164: BHYOB78_01175
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Entry
BHYOB78_01175 CDS
T04742
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
bhd
Brachyspira hyodysenteriae ATCC 27164
Pathway
bhd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
bhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BHYOB78_01175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
bhd03400
]
BHYOB78_01175
DNA repair and recombination proteins [BR:
bhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BHYOB78_01175
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BHYOB78_01175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
MAAL_C
DUF244
Motif
Other DBs
NCBI-ProteinID:
ANN62516
UniProt:
A0A3B6VVJ0
LinkDB
All DBs
Position
complement(1338486..1340534)
Genome browser
AA seq
682 aa
AA seq
DB search
MDFKLESNFKPSGDQVTAIDSLVKGLENNNKYQTLLGVTASGKTFTIANVIEKANRPTLV
MSHNKTLAAQLYRELKDFFPNNAVEYFVSYYDYYQPEAYVPAKDLYIDKDASVNDEIDRL
RLKATTSLLERRDVIIVASVSCIYGLGSPEDYRKLYIAIEKDGEYDRDEIIEKLVSIQYE
RVKDVLERARFKVIGDTIEIMSAYSDEVIRVEFFGDTVERIIKINPITRQKLAEQDRVVI
YPAKHFVTGGDKLAAGIKLIEEELDEQYNKFKSEGKLVEAERIYGRTKYDLEMLKEVGYC
AGIENYSRPLSGRKEGDRPACLIDYFPEDFLTIIDESHVSVPQIRGMFFGDRSRKETLVK
YGFRLPSALDNRPLYFEEFEKLTHDTIYISATPAEYELKKSSQVVEQIIRPTGLLDPIIE
VYPIDGQIDRILEEIKKTVSNNERIFITTLTKKMAEDLTKYLNENGVRTRYLHSDIQTVE
RVEIIRDLRLGAFDVLVGINLLREGLDVPEVSLILILDADKTGFLRNTTTLIQTIGRAAR
NANGRVIMFADSISDAMKVAIEETERRRTIQMEYNKEHNITPKTIIKKIQDIIEREEKVE
TSYELHFDFRRFNERVKIDPEQKSDDYIKELEKEMKKASDSLEFEKAIEIREKINQLKQL
KPQKKNVHKNVTSKNPNGKRKK
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggatttcaaattagaatcaaatttcaagccttcaggcgatcaagtaacagcaatagat
tccttagttaaaggacttgaaaataataataaatatcaaactcttcttggagttacagca
agcggaaaaacatttactatagcaaatgttatagaaaaagctaaccgccctactttagta
atgtctcacaataaaactttggcagcacagctttacagagagcttaaagatttttttcct
aataatgctgttgaatactttgtttcatattacgattattatcagcctgaagcctatgtt
cctgcaaaagatttatatatagacaaagatgcttctgttaatgatgaaattgacagatta
agacttaaagcaacaacttcgcttcttgaaaggagagatgttataatagtggcttctgtt
tcttgtatatacggtttgggatctcctgaagattatagaaaattatacattgccatagaa
aaagacggtgaatatgacagagatgaaataattgaaaaattagtatctatacaatatgaa
cgtgttaaagatgtacttgagagagcaagattcaaagttataggcgatactatagaaata
atgagtgcttattctgacgaggttataagagtagaatttttcggtgatactgttgagcgt
ataataaaaatcaatccaattacaagacagaaactagcagaacaagacagagttgtaata
tatcccgcaaagcacttcgttacaggaggagataaattagctgcaggtataaaattaata
gaagaagaacttgatgagcagtataataaatttaaatcagaaggaaaattagtagaagca
gaaagaatatacggaagaacaaaatatgatttagaaatgcttaaagaagtaggatactgt
gcaggaatagaaaattattcacgtccattatctggaagaaaagaaggagacagacctgct
tgtttaatagactattttcctgaagactttttaactattatagatgaatcgcatgtgagt
gtacctcagattagaggaatgttttttggagacagaagcagaaaagagactttagtaaag
tatggattcagacttccttcagctctagacaacagacctttatattttgaagaatttgaa
aaacttactcatgatacaatatatatcagtgccacaccggcagaatatgaattaaagaaa
agctctcaggttgtagaacaaataattcgtcctacaggattgcttgatcctataattgaa
gtataccctattgacggacaaatagacagaatacttgaagaaataaaaaagactgtatca
aacaatgaaagaatattcataactacacttacaaaaaaaatggctgaagaccttacaaaa
tatttaaatgaaaatggagtaagaactcgttatcttcattcagatattcaaactgtagaa
cgcgttgaaataataagagatttaagacttggtgcttttgatgtacttgtaggtattaac
cttttaagagaggggcttgatgtacctgaagtatcattaatattaattcttgatgcagat
aaaacaggatttttaagaaataccactactctaatacagactataggacgcgcagctaga
aatgctaacggaagagttataatgtttgcagactctataagcgatgctatgaaagttgct
atagaagaaactgaaagaagaagaacaatacagatggagtataataaagaacataatatc
actcctaaaacaatcatcaaaaaaatacaggatatcattgaacgtgaggagaaagttgaa
acatcttatgagcttcatttcgactttagaagatttaatgaaagagtaaaaattgaccct
gaacagaaaagcgatgattatataaaagagcttgaaaaagaaatgaaaaaagcatcagac
agcttagaatttgaaaaggctattgaaataagagaaaaaataaaccaattaaaacaatta
aagcctcaaaagaaaaatgttcataaaaatgtaacttccaaaaatccaaatggaaagcgt
aaaaaataa
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