Brachyspira hyodysenteriae ATCC 27164: BHYOB78_10630
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Entry
BHYOB78_10630 CDS
T04742
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
bhd
Brachyspira hyodysenteriae ATCC 27164
Pathway
bhd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
bhd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BHYOB78_10630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
bhd03019
]
BHYOB78_10630
Messenger RNA biogenesis [BR:
bhd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
BHYOB78_10630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_PNO1_2nd
KH_NusA_2nd
HDOD
KH_KhpA-B
KH_NusA_C
DUF7669
Motif
Other DBs
NCBI-ProteinID:
ANN64305
UniProt:
A0A3B6W6K5
LinkDB
All DBs
Position
complement(2235872..2237401)
Genome browser
AA seq
509 aa
AA seq
DB search
MNPVIIITSVVVAFVFGYTTRFIIAKIKLNSTEIITHKLLQSAREQAENERKTILSEANS
EIQKERNRLESENRDRKAEIQKLENRVLQREANIDKKSQYLENKEHNIENKMKKIKEQED
KLTSVIQDAEKELERIAGLTKEEAKADLIRSIEEDAKKSATKIVDNIEKNAIETGEKKAR
EIIVQTIQRLSSEVAQETSVTSVSLPSEEMKGRIIGREGRNIRMLETLTGVDIIIDDTPE
AVVISCFDPVRKHIAKVSLEKLILDGRIHPARIEEVVERTKREVEDSIMEAGENAIVDLN
LTTMHHELIRHMGRLQYRTSYGQNMLFHSKEVANIAAMIAAEIGANVEMAKRSAFLHDIG
KAIETEGEGSHAMSGADLAKRCGEKEEVVNAIRAHHNDVDTQTVEAVIVKAADAISAARP
GARRESFESYIKRLDNLEKIADSIEGVEKSFAIQAGRELRVMAKSDIVDDIQAKQIARDI
AKRIEDELKYPGIIRVTVIRETRAVEVAR
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgaatccagtaataattatcacctctgttgtagttgcgtttgtttttggatatacaacc
cgttttattatagctaaaatcaagcttaattctacggaaataataacacataaattgctc
caaagtgcaagagagcaagcagaaaatgagagaaagactatactttctgaagctaattct
gaaatacagaaagaacgtaatagactagaaagcgaaaatagagatagaaaagctgaaatt
cagaaattagaaaatagagtgctacaacgagaggctaatattgataaaaagtctcaatat
ttggaaaataaagagcataatattgagaataaaatgaaaaaaataaaagaacaggaggat
aaattaacttctgttatacaagatgcggaaaaagaacttgaaagaatagcgggacttact
aaggaagaagctaaggctgacttgataagaagcatagaagaagatgctaaaaaatctgct
actaaaatagttgacaatatagaaaaaaatgctatagaaacaggagaaaaaaaagcaagg
gaaattatcgtacaaactatacaaagactttcaagcgaagtggctcaggaaacttctgta
acatctgtatctttacctagtgaagaaatgaaaggaagaatcataggaagagaaggaaga
aatatcagaatgcttgagacacttactggtgttgatattattatagatgatactcctgaa
gctgttgtaatatcatgtttcgatcctgtaagaaagcatattgctaaagtttcattagaa
aagcttatcctagatggaagaattcaccctgccagaatagaagaagttgttgagagaact
aaaagagaagttgaagattctataatggaagctggtgaaaatgctattgtagatttgaat
cttaccactatgcaccatgaattaataaggcatatgggaagacttcagtatagaacaagt
tatggacaaaatatgcttttccatagtaaagaagttgctaatattgctgctatgatagct
gctgaaataggtgccaatgtggaaatggctaagagaagtgcatttttgcatgatatagga
aaggctatagaaacagaaggcgagggttctcatgctatgagtggtgccgatttagctaaa
agatgcggagaaaaagaagaagtagttaatgctataagagcgcatcataatgatgttgat
actcaaactgttgaggctgtaatagtaaaggctgcagatgctattagtgctgcaagacct
ggagcaagaagagaatcttttgaaagttacataaaacgtttagataatttagaaaagatt
gctgatagtatagagggtgttgaaaaatcatttgctatacaggcaggccgtgaacttaga
gttatggctaaaagcgatatagtagatgatattcaagctaaacaaatagcaagagatatt
gctaagagaatagaagatgaattgaaatacccaggtataattagagttactgttattaga
gaaactagagcagttgaagttgcaaggtaa
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