Bartonella henselae Houston-1: BH08160
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Entry
BH08160 CDS
T00180
Symbol
topA
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
bhe
Bartonella henselae Houston-1
Brite
KEGG Orthology (KO) [BR:
bhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
bhe03032
]
BH08160 (topA)
03400 DNA repair and recombination proteins [BR:
bhe03400
]
BH08160 (topA)
Enzymes [BR:
bhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
BH08160 (topA)
DNA replication proteins [BR:
bhe03032
]
Prokaryotic type
DNA Topoisomerases
BH08160 (topA)
DNA repair and recombination proteins [BR:
bhe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
BH08160 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
CAF27615
UniProt:
A0A0H3M3C2
LinkDB
All DBs
Position
complement(919836..922397)
Genome browser
AA seq
853 aa
AA seq
DB search
MNIVIVESPAKAKTINKYLGSQYKVVASFGHVRDLPAKDGSVLPDQDFSMKWDVDSAAAK
RLNEIAKAVKEADSLILATDPDREGEAISWHILDVLRQKKVLKDKPVKRVVFNAITKKSV
LDAMNNPRDIDTSLVNAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRIICDR
ESEIEHFIKEDYWSITTDLKTIRNDGFQARLTMFNQKKIGKLDIQSQEQADQIRLMLEKA
KYHALSVEAKPTKRNPFPPFTTSTLQQAASSKLGFSASRTMQIAQKLYEGIEINGEMAGL
ITYMRTDGVQIAPEAIDSARKVIHESFGSDYIPEKPRFYSTKAKNAQEAHEAIRPTDFQR
IPNQVRNFLDSDQAKLYELIWKRAVASQMRSAEIERTTVEIEAQQGENYANLRATGSVIR
FDGFLSLYTDQRDEENNEENETTRLPQINTGEELTKEKVDAIQHTTEPPPRYSEASLIKK
LEELGIGRPSTYASTLATLSDRGYIIIDKRKLIPDVKGRIVTAFLENFFNRYVEYGFTAD
LEEKLDLISDGKLSWKDVLRDFWDGFNASITNIQELRITNVLDVLNVTLAPLAFPVREDG
SDVRSCPLCTNGQLSLKLGRYGAFVGCSNYPECKYTRQLGTDPGEENEAIRNDEPVILGV
DPKTGKDVTLRNGRFGPYIQLGESKEAKRAGLPKEWQAEKITLEKALSLISLPREIGIHP
ETGKTITATIGRYGPYLTHDGKYAPLLNVDEVFDIGINRAVTVLAEKQENKTKRSRTTTA
ALATLGNHPDGGVVTVRNGRYGPYVNWGKVNATLPKDKDPINVTLSEALELISVKASGKK
TTLKRASTKTKET
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atgaatatcgttatcgttgaatctccagcaaaagcaaaaacaattaataaatatcttgga
tctcaatataaagtagtagcatcatttggacatgttcgtgatttgcccgcaaaagacggc
tccgttctacctgatcaagatttttctatgaaatgggatgtagattctgctgccgctaaa
cgtttaaatgaaatagcaaaagcagttaaagaagccgatagtcttatcttagcgacagac
cctgatcgtgaaggggaagctatttcatggcatattctagatgttcttcgtcaaaaaaaa
gttttaaaagataaacctgttaagcgggttgtattcaatgccattaccaaaaagtctgta
cttgatgcaatgaataatccacgtgatattgatacatcacttgtaaatgcttatcttgca
cgtcgtgctctcgattatcttgttggttttacactctcacctgttttatggcgtaaactc
cccggagcacgttcggctggtcgggttcaatctgttgctctgcgtattatttgtgatcgt
gaatcagaaatagaacattttatcaaagaggattattggtctattacaacagacttaaaa
accatccgcaatgacggctttcaagcaagattaacaatgtttaatcaaaaaaagattggc
aagcttgacattcaatctcaagaacaagcagatcaaattcgccttatgttagagaaggca
aaatatcatgcactcagtgttgaagcaaagcctacaaagagaaatccttttcctccgttt
acaacatctactttacaacaagcggcttcttcaaaactgggcttttcagcttctcgtacc
atgcaaattgctcaaaagctctatgaagggattgaaattaatggtgaaatggctgggctt
attacctatatgcgtactgatggtgtacaaatagcaccagaagccatagattcagcacga
aaagtaattcatgaatcttttggtagtgattatattcctgaaaaaccacgtttttattca
acaaaagcaaaaaatgcacaggaagcacatgaagccatccgtccaaccgattttcaacgt
attcctaatcaagtacggaatttcctcgatagcgatcaggcaaaactctatgaactgata
tggaaacgcgctgttgctagccaaatgcgttctgctgaaattgaacgcacaactgttgaa
attgaagcacagcaaggggaaaattacgcaaatttacgcgcaacaggttctgttattcgt
tttgatggctttctttctctctacactgatcaacgagatgaagaaaacaatgaagaaaac
gaaacaacacgtttgccacaaattaatactggtgaagaacttactaaagaaaaggttgac
gccatacaacataccactgaaccccctcctcgttattctgaagcttccctaattaaaaag
cttgaagagctaggaataggtcgtccttcaacctatgcatccacattggctacactatct
gatcgtggatatatcataattgataaacgaaagcttattcccgatgttaaaggacgtatt
gttacagcctttcttgaaaatttctttaatcgctatgtagaatacggtttcacggcagat
cttgaggaaaaactggatcttatatcggatggaaagctttcttggaaagatgtattgcgc
gatttttgggatggatttaatgcttctattaccaatatccaagaattacgtataacaaat
gttcttgatgttttaaatgtaacattagcaccccttgcttttcctgtgcgtgaagatgga
agtgatgttcgttcctgtcccttatgtacaaacggccagttatcattaaaactcggtcgt
tatggtgcatttgttggctgttctaattatcccgaatgcaaatatacacgccaacttggc
acagatccaggagaagagaatgaagccatacggaatgatgaacccgttatacttggagtt
gaccctaaaacaggaaaagatgtcactcttcgcaatggtcgttttgggccctatattcaa
cttggtgaaagcaaagaagctaagcgtgcagggttaccaaaagaatggcaagcagaaaaa
atcactcttgaaaaagctttgtctttaatatccttgccccgtgaaattggtattcatcct
gaaaccggcaaaacaatcactgcaacaattggccggtatggcccataccttacgcatgat
ggaaaatatgctccccttctcaatgtagatgaagtttttgatattggcatcaatcgcgct
gttacagtacttgccgaaaaacaagaaaataaaacaaagcgaagtagaacaacaactgca
gcgttggcaacattagggaaccacccagatgggggagttgtcaccgtgcgcaacgggcgt
tatggtccctatgttaattggggtaaagttaatgcaacattgccaaaagataaagatcca
attaatgtgacactttcagaagcattagaacttatatcggttaaagcatccggtaaaaaa
acaaccttaaaaagagcttctactaaaacaaaagagacataa
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