Bartonella henselae Houston-1: BH11530
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Entry
BH11530 CDS
T00180
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor rpod
KO
K03086
RNA polymerase primary sigma factor
Organism
bhe
Bartonella henselae Houston-1
Brite
KEGG Orthology (KO) [BR:
bhe00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
BH11530 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
bhe03021
]
BH11530 (rpoD)
Transcription machinery [BR:
bhe03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BH11530 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
DUF1835
DUF3130
Tachylectin
Motif
Other DBs
NCBI-ProteinID:
CAF27936
UniProt:
A0A0H3LXV0
LinkDB
All DBs
Position
complement(1272715..1274718)
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AA seq
667 aa
AA seq
DB search
MATKVKQKDNTEVTTQASVDSPLLDFSDDAIKKMVKIAKKNGYVTMDELNAVLPPDEVTS
EQIEDTLAMFSEMGINVVDDEGEAENYEEEVRVEGGDLVEATSNALVTTAKRELTDRTDD
PVRMYLREMGAVELLSREGEIAIAKRIEAGRETMIAGLCESPLTFQALIIWREELKEQRI
LLREIIDLEMTYAGPEAKQAPVIERSEVQKVKEEKSSSAMRDMENIARDIGVEEDDEEDD
DVNLSLAAMENELCPQVMGTLDFIAETYVKLRKLQDQHVESSLAERKEGALSPSQRKKCI
QLKSELVQAVKSLSLNQNRIESLVEQLYDINKRLIHNEGKLKRIANNYGVGHEEFLKEYQ
GRELDADWINYIATLSGRGWKEFSKREAKEIKTLRSEIQNLAQETAISIGEFRRIVTQVQ
KGERESTIAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYK
FSTYATWWIRQAITRSIADQARTIRIPVHMIETINKIVRTSRQILHEIGRDPTPEELSSK
LSMPLEKVRKVLKIAKEPISLETPVGDEDDSHLGDFIEDRNALLPIDAAIQANLRDTTTR
VLASLTPREERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRK
LRSFLDS
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaggttaaacagaaagacaatacagaagtaacgacccaagcgagtgtggac
agtcctcttctcgatttttctgatgatgccatcaaaaaaatggttaaaatcgccaaaaaa
aatggttacgtgacaatggatgaactgaacgcagttcttcctcctgatgaggttacatct
gaacaaattgaagataccttggcgatgttctcggagatgggcattaatgtcgtggatgat
gagggtgaggctgagaattatgaagaagaggttagggtagaggggggggatttagtagaa
gctacgagcaatgcgcttgtaacgacagccaagcgtgagctaacagatcgcaccgatgat
ccagtgcgcatgtatttgcgtgagatgggggctgttgagctcctttcacgagaaggtgaa
attgccattgctaagcgtattgaagcaggacgtgaaacaatgattgcggggctttgtgag
agtcccttaacttttcaggctcttattatctggcgtgaagaattaaaagagcagcgtatt
ctcctgcgtgaaattattgatcttgaaatgacttatgcaggtccagaagctaagcaggct
cctgttattgaacgaagtgaggtccaaaaagtaaaagaggaaaagtcctcttctgccatg
cgtgatatggagaatattgcgcgagatataggtgtcgaagaggatgatgaagaagacgat
gatgttaatttatcgcttgctgcaatggaaaatgaactctgtcctcaggttatgggaact
ttggattttattgctgaaacctatgtgaaattgcgaaaattacaagatcagcatgttgaa
agtagtttggcagagcgtaaagagggagctctttcaccttcacagaggaaaaaatgtatt
caattgaagagcgaattggttcaggcagtgaaatctctttctttgaaccaaaatcgtatt
gagtcgttggttgagcagctttatgatatcaataagagattgattcataatgaaggtaag
ttgaagcggattgctaataattatggcgttggtcatgaggagtttttaaaagaataccaa
ggtcgtgaattagatgcagattggattaattatattgcaactttgtctggacgcggttgg
aaagagttttctaagcgtgaagcgaaagaaattaaaactttgcgcagcgaaatacaaaat
ttggcgcaagaaacagctatttcgattggcgaatttcgtcggattgtgacacaagtgcag
aaaggtgagcgcgaatcgacaattgcaaaaaaggaaatggtggaagctaatttgcgtctc
gtaatttcaattgcaaaaaaatatactaatcgtggtttgcagtttcttgatcttattcaa
gaaggcaatatcggtttgatgaaggcagtggataaatttgaatatcgtcgtggatataag
ttttcaacttatgcaacatggtggattcgtcaggcaattacacgctcaattgctgatcag
gcacgcactattcgtattcctgttcatatgattgaaacaattaataaaattgttcgtaca
tcgcgtcagattttacacgaaatcgggcgtgaccctacgccagaagaattgtctagtaaa
ctttctatgcccttagagaaagtgcgaaaagttcttaaaattgcaaaggaaccgatttca
cttgaaacacccgttggtgatgaagatgattcccatttgggtgattttattgaagatagg
aacgcattattgccgatagatgccgctattcaagctaatctgcgcgatacgacaacgcgt
gtacttgcttcactaacaccacgtgaagaacgtgttttgcgaatgcgttttggtatagga
atgaatactgatcatacattggaggaagttggtcaacagttttcagttacacgcgagcgc
attcgtcagattgaagcaaaggcgcttcgtaagttaaagcatcctagtcgttcacgcaaa
ttgcgtagttttcttgattcttaa
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