Prevotella heparinolytica: C3V43_00605
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Entry
C3V43_00605 CDS
T05405
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
bhf
Prevotella heparinolytica
Brite
KEGG Orthology (KO) [BR:
bhf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
bhf02000
]
C3V43_00605
Transporters [BR:
bhf02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
C3V43_00605
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD-like_3
SusD_RagB
TPR_1
TPR_2
TPR_12
Ibs_toxin
TPR_10
TPR_6
Motif
Other DBs
NCBI-ProteinID:
AVM56442
LinkDB
All DBs
Position
complement(148887..150725)
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AA seq
612 aa
AA seq
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MKKIILIILAVISFTACDIDRLPYGSMAAENITADPNSSLESLLNGCYAQLKHWSDPMHR
CGEYAGDNMMIRGSSTDAFYEFISFSRTPQNYRLQSFWDYSYKAIAQSSNIINMIAEGQN
DEVDNKLGECYYIRGMLYFYLCRAYGRPYAQNPETNLGVPIVNGTPADINNLNLPDRATV
KQTYAQAISDLRKAAAMMTINNGAIYASKEAAQAMLSRIYLYMSGTYEKPNTNYADSAAY
FATQVINSDKYSLLSRSDFMRYNTFTPEENRETIFAIKRVASEYSGYDHYYGVGGMYANI
GGMGWGEMYASAKYIGLLNETGRNDWREDHYKIVDARAAFIEPTYDKSKTEVFRFIKPTF
PLEVNISKDKITGYNYVQATLLKENGKYYAIEKNVTQYKIKADDPNKLEADKDNTGKVIT
KDIKYELEIIDAEQGYFKILNYNAGTNITNVLVEVKGVEDYFISLNRVYPQFYIVKCSRE
GEDSHLHSPVISRLGEIYLNRAEAYAKQGKYTEALADLNIIRNRAIVGGGYESLDASNAK
ERIDKERQLELAYQAERSYDVFRNNDPLVRRYPGPHRQLEDIPATDYRVVYYIPQDAINS
YPGTLTQNPTHN
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaataattcttatcatattagctgttatatcgttcactgcttgtgacatcgat
cgcctcccttatggctcgatggcagcagaaaatatcactgcagatcccaactcttcactc
gagtctttattgaacggctgttatgcacaactcaaacattggtccgaccccatgcaccgt
tgtggtgaatacgcaggtgataacatgatgattcgcggttcgtccacagatgcattctat
gagtttatttcattcagccgtactccgcagaactatcgtttacagagcttttgggattac
agttacaaagccattgctcagagttccaatatcatcaatatgatagctgaaggacaaaat
gatgaagtagataataaattaggagaatgttattacatccgtggtatgctctatttttat
ttatgccgtgcttacggtcgtccttatgcccaaaatcctgaaaccaatctcggggttccc
atcgtaaacgggacacctgcagatatcaacaacctaaatttaccggatcgtgcaaccgta
aagcaaacttatgcacaagctatcagcgaccttcgcaaggcggcggcaatgatgactata
aacaacggagcaatctatgcctccaaagaagctgcacaagctatgctttcacgtatttat
ctgtatatgagcggtacttacgagaaacccaatacaaattatgccgattctgctgcctat
tttgccacacaggttatcaactctgataaatattctttattatcccgttccgactttatg
agatacaacacattcacgccggaagagaatagagaaacgatctttgcaatcaaacgtgtt
gcatccgagtattccggatacgaccattattatggtgtcggcggtatgtatgccaatatt
ggcggtatgggatggggtgaaatgtatgccagtgctaaatacattggccttttgaatgaa
accggacgaaacgattggcgcgaagaccactacaaaattgttgatgctcgcgcggctttc
attgaacccacgtatgataaatccaaaacagaagttttccgatttatcaaacctactttt
ccattggaggtaaacatctcaaaagataaaatcaccggttataattatgtgcaagccact
cttttgaaagagaatggcaaatattacgcaatagaaaagaatgtaacacaatataaaatc
aaagcggacgatcctaataagctggaagctgataaagataatacaggaaaagttataaca
aaagacatcaaatatgaactggaaataatagatgcagaacaaggttatttcaagatactc
aactacaacgcaggaacaaatattaccaatgttcttgtagaagtgaaaggcgttgaagat
tatttcatctctttgaatcgtgtttatccacaattctacatcgtcaaatgttcgcgcgaa
ggtgaagattcccatttacactctcctgttatttcccgtttgggcgagatttatctgaat
cgtgcagaagcttatgccaaacaaggcaaatatacagaggcccttgccgatttgaatata
attcgtaaccgtgccatcgtaggtggaggatatgaatctttagacgcaagtaatgctaaa
gaacgcattgataaagaacgccagctggaattggcttatcaggcagaacgtagctacgat
gtgtttcgcaacaacgacccattggtacgtcgttacccggggcctcatcgtcaactcgaa
gatattcccgctacggattatcgtgtagtttattacattcctcaagatgctatcaactca
tatccgggtactttgacacaaaatccgacgcataactaa
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