KEGG   Bacteroides heparinolyticus: C3V43_01785
Entry
C3V43_01785       CDS       T05405                                 
Symbol
rny
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
bhf  Bacteroides heparinolyticus
Pathway
bhf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:bhf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    C3V43_01785 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:bhf03019]
    C3V43_01785 (rny)
Messenger RNA biogenesis [BR:bhf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     C3V43_01785 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_KhpA-B Fez1 DsrD NtrY_N
Other DBs
NCBI-ProteinID: AVM56643
UniProt: A0A2R3MNW4
LinkDB
Position
complement(454445..455983)
AA seq 512 aa
MTVVTIVVSIACFIVGGFASYLFFKHGLKKKYDGILKEAEAEAEVIKKNKLLEVKEKFLN
KKADLEKEVAIRNQKIQQAENKLKQRELVLNQRQEEIQRKKMEAEAVKENLEAQLAIVDK
KKEELEHMQRQEIEKLEAISGLSAEEAKERMVESLKEEAKTQAQSYINDIMDDAKLTASK
EAKRIVIQSIQRVATETAIENSVTVFHIESDEIKGRIIGREGRNIRALEAATGVEIVVDD
TPEAIVLSAFDPVRREIARLALHQLVTDGRIHPARIEEVVAKVRKQVEEEIIETGKRTTI
DLGIHGLHPELIRIIGKMKYRSSYGQNLLQHARETANLCAVMASELGLNPKKAKRAGLLH
DIGKVPDEEPELPHALYGMKLAEKFKEKPDICNAIGAHHDEVEMTSLLAPIVQVCDAISG
ARPGARREIVEAYIKRLNDLEQLAMSYPGVTKTYAIQAGRELRVIVGADKIDDKATENLS
GEIAKKIQDEMTYPGQVKITVIRETRAVSYAK
NT seq 1539 nt   +upstreamnt  +downstreamnt
atgacagtagttacaatagtagtatccattgcctgcttcattgtcggaggattcgcctcg
tacttgttcttcaagcacgggctgaaaaagaaatacgacggcatcctgaaagaagcggaa
gccgaagcggaagtaattaaaaagaataagttgctggaagtgaaggaaaaattcctgaac
aagaaagccgatttggaaaaagaggtagccatccgcaaccagaaaatacagcaggcagag
aacaaactgaagcaacgtgaactggtattgaaccagcgccaagaagagattcaacgcaaa
aaaatggaagccgaggccgtaaaagagaatctggaggcccaattagccattgtagacaaa
aagaaagaagagttggaacacatgcaacggcaagagatagagaaactggaagccatatcc
ggactctctgccgaagaagccaaagagcgcatggtggaatcgctgaaagaagaagccaaa
acgcaagcccaatcatacatcaacgacattatggatgatgccaaactgacggcaagcaaa
gaggccaaacgcatcgtcatacaatccatccaacgcgtggcaacagaaacagccatcgaa
aattccgtaaccgtattccacatcgagtcagacgaaatcaaaggtcgcatcatcggtcgc
gaaggccgcaacatccgtgcattagaagctgctaccggtgtagaaatcgttgtagacgat
acgccagaagccatcgtattgtctgccttcgaccctgttcgccgtgagatagctcgttta
gctcttcaccaactggtcacagacgggcgcattcatcctgcacgtatcgaagaagtagta
gccaaagtgcgcaagcaagttgaagaagaaatcatagaaaccggcaagcgcaccaccatc
gacttgggcatccacggtctgcaccccgaactcattcgtatcatcggtaagatgaaatat
cgttcttcctacggccagaaccttttgcagcatgcccgcgaaacggccaacctttgcgcc
gtgatggcatcggaactggggctgaaccccaagaaggccaaacgtgccggattgctgcac
gacataggcaaagtgcccgatgaagagccggaattgccgcacgctctctacggcatgaag
ctggccgagaagtttaaggaaaaaccggacatctgcaatgccatcggagcccaccacgac
gaagtggagatgaccagcctgcttgcccccatcgtgcaagtgtgcgacgccatatcgggg
gcacgcccgggagcacgccgcgaaatcgtagaagcatacatcaagcgactgaacgacctt
gaacaactggccatgtcctatccgggcgtaacgaagacatacgccatccaagccggccgc
gaactgcgtgtcattgtcggtgccgacaagattgacgacaaggcaacggaaaatctctca
ggcgaaatagccaagaagattcaggatgagatgacctatcccggccaggtgaagattacc
gtcatccgcgaaacgcgcgccgtgagctacgctaagtaa

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